Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.24□□□□□ -2.21
RNF139Q8WU17 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.24□□□□□ -2.21
RNF139Q8WU17 AC026371.1-201ENST00000551867 419 ntBASIC1.24□□□□□ -2.21
RNF139Q8WU17 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
RNF139Q8WU17 AP003465.2-201ENST00000602571 373 ntBASIC1.24□□□□□ -2.21
RNF139Q8WU17 MIR8076-201ENST00000611401 83 ntBASIC1.24□□□□□ -2.21
RNF139Q8WU17 AC024614.3-201ENST00000637860 256 ntBASIC1.24□□□□□ -2.21
RNF139Q8WU17 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
RNF139Q8WU17 RNU6-1252P-201ENST00000363054 104 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 RNY4P14-201ENST00000363656 96 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 RNU6-784P-201ENST00000384330 106 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 MIR515-2-201ENST00000384883 83 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 MIR515-1-201ENST00000384884 83 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RNF139Q8WU17 RNU6-1093P-201ENST00000391194 107 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
RNF139Q8WU17 MTND1P11-201ENST00000456661 876 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 RNU7-187P-201ENST00000458985 68 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 HMGN2P9-201ENST00000476875 229 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AF186996.7-201ENST00000492781 209 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.23□□□□□ -2.21
RNF139Q8WU17 AC109635.3-201ENST00000529536 185 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 ZNF519P2-201ENST00000557032 169 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 FGF7P1-201ENST00000582820 288 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AL133215.3-201ENST00000609801 448 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 AC099654.5-201ENST00000636479 350 ntBASIC1.23□□□□□ -2.21
RNF139Q8WU17 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 SNORA18.2-201ENST00000383865 132 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 Y_RNA.402-201ENST00000383972 102 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 RNU6-128P-201ENST00000383976 107 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 Y_RNA.516-201ENST00000384541 124 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RNF139Q8WU17 RPS26P42-201ENST00000413485 326 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.22□□□□□ -2.21
RNF139Q8WU17 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 MTND1P35-201ENST00000526739 508 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RNF139Q8WU17 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.22□□□□□ -2.21
RNF139Q8WU17 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.22□□□□□ -2.21
RNF139Q8WU17 AL138726.1-201ENST00000614873 333 ntBASIC1.22□□□□□ -2.21
RNF139Q8WU17 Y_RNA.135-201ENST00000363439 95 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 RNU6-968P-201ENST00000384076 107 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 Y_RNA.450-201ENST00000384198 113 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 Y_RNA.530-201ENST00000384587 101 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 RNU6-95P-201ENST00000384697 107 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MIR521-1-201ENST00000384902 87 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 RNA5SP494-201ENST00000410653 129 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
RNF139Q8WU17 AL590632.1-201ENST00000424289 371 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MTCO3P18-201ENST00000440206 761 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.21□□□□□ -2.22
RNF139Q8WU17 RPS26P45-201ENST00000471748 340 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.21□□□□□ -2.22
RNF139Q8WU17 RNU6-1041P-201ENST00000516254 102 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.21□□□□□ -2.22
RNF139Q8WU17 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MIR3672-201ENST00000584290 82 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MIR4781-201ENST00000585250 76 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 AC016727.2-201ENST00000603988 621 ntBASIC1.21□□□□□ -2.22
RNF139Q8WU17 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.21□□□□□ -2.22
RNF139Q8WU17 Y_RNA.9-201ENST00000362354 101 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 SNORD50.1-201ENST00000362987 71 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 Y_RNA.151-201ENST00000363566 112 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 Y_RNA.164-201ENST00000363709 102 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 RNU6-877P-201ENST00000383868 107 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AL117342.1-201ENST00000404861 406 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC004866.1-201ENST00000411748 78 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 ZNF885P-201ENST00000420174 1098 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC079354.2-201ENST00000453523 154 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 RPS29P25-201ENST00000481709 171 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF139Q8WU17 TRBVA-201ENST00000498804 316 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC011406.1-201ENST00000512440 370 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 RNU6-256P-201ENST00000516747 97 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF139Q8WU17 MIR4709-201ENST00000577272 72 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC146944.4-201ENST00000602697 718 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC012557.2-201ENST00000605919 418 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.2□□□□□ -2.22
RNF139Q8WU17 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
RNF139Q8WU17 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RNF139Q8WU17 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RNU6-545P-201ENST00000362681 104 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 Y_RNA.89-201ENST00000363031 102 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 Y_RNA.100-201ENST00000363141 102 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 Y_RNA.414-201ENST00000384011 101 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RNU6-950P-201ENST00000384651 107 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 MIR487A-201ENST00000385009 80 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 MIR549A-201ENST00000385268 96 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 RNU6-1148P-201ENST00000410992 104 ntBASIC1.19□□□□□ -2.22
RNF139Q8WU17 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms