Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL606489.2-201ENST00000433886 234 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AC016717.1-201ENST00000448918 286 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MTCO3P8-201ENST00000453691 755 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MRPS36P4-201ENST00000534436 298 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AL157687.1-201ENST00000554853 619 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AC133485.1-201ENST00000567176 124 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MIR3664-201ENST00000579074 99 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MIR5006-201ENST00000583027 110 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MIR5692C1-201ENST00000585309 91 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AC004223.2-201ENST00000590309 544 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AP001330.5-201ENST00000607176 411 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MIR6779-201ENST00000617283 64 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 U6.108-201ENST00000637764 58 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
LMX1AQ8TE12 RNU6-1123P-201ENST00000362347 106 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RNU6-1317P-201ENST00000364582 104 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RNY3P9-201ENST00000384727 106 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RNA5SP494-201ENST00000410653 129 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.76□□□□□ -2.29
LMX1AQ8TE12 SNX2P2-201ENST00000424553 323 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 MTND3P9-201ENST00000429526 346 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AC114982.1-201ENST00000469402 321 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AF186996.7-201ENST00000492781 209 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AC091885.1-201ENST00000506658 268 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 TPRKBP2-201ENST00000565969 475 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AC100830.2-201ENST00000581636 240 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 RN7SL793P-201ENST00000583259 296 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AP000907.4-201ENST00000604143 237 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 MZT1P2-201ENST00000604387 248 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AL158063.1-201ENST00000615349 536 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 AC008873.1-201ENST00000625051 138 ntBASIC0.76□□□□□ -2.29
LMX1AQ8TE12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LMX1AQ8TE12 MTND4P5-201ENST00000435821 1374 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 Y_RNA.1-201ENST00000352915 104 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 Y_RNA.378-201ENST00000365652 113 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AL663109.1-201ENST00000411498 844 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC016909.1-201ENST00000415916 166 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AL359672.1-201ENST00000442302 409 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 U8.21-201ENST00000459536 136 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 RPS26P45-201ENST00000471748 340 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 RNU6-1146P-201ENST00000516282 102 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 RNU6-344P-201ENST00000516635 111 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 Y_RNA.695-201ENST00000516715 107 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC104383.1-201ENST00000530297 370 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.75□□□□□ -2.29
LMX1AQ8TE12 MIR4709-201ENST00000577272 72 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC121247.2-201ENST00000604776 136 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AL365434.2-201ENST00000607979 234 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 MIR8076-201ENST00000611401 83 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 RMST_3.1-201ENST00000611651 109 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 AC073114.1-201ENST00000612027 490 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 OR5AK4P-201ENST00000635912 903 ntBASIC0.75□□□□□ -2.29
LMX1AQ8TE12 SNORD115-8-201ENST00000363856 82 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 SNORD115-38-201ENST00000365037 82 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 RNU4-20P-201ENST00000365601 151 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 RNU6-331P-201ENST00000384724 107 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 COX6CP10-201ENST00000416832 224 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 RNU6-261P-201ENST00000459506 102 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC083798.1-201ENST00000472671 131 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 Y_RNA.654-201ENST00000497848 106 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 HMGN1P12-201ENST00000499125 195 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 RN7SKP49-201ENST00000516675 260 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC025647.1-201ENST00000517879 253 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AL390123.1-201ENST00000603216 237 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 SNRPGP20-201ENST00000604477 205 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC004492.1-201ENST00000607036 742 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 AC007684.1-201ENST00000609671 477 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.74□□□□□ -2.29
LMX1AQ8TE12 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms