Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 Y_RNA.358-201ENST00000365491 99 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 SRIP3-201ENST00000413200 219 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 AC245102.2-201ENST00000448956 180 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.38□□□□□ -2.03
USP38Q8NB14 RNU7-193P-201ENST00000516723 65 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.38□□□□□ -2.03
USP38Q8NB14 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.38□□□□□ -2.03
USP38Q8NB14 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP38Q8NB14 WWP1P1-201ENST00000466609 2769 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 RNU6-874P-201ENST00000362390 105 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Y_RNA.132-201ENST00000363421 102 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Y_RNA.187-201ENST00000363918 113 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Y_RNA.314-201ENST00000365114 102 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 RNU6-1040P-201ENST00000383974 107 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Y_RNA.419-201ENST00000384041 102 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 SNORD14D-201ENST00000384390 87 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 MIR625-201ENST00000385047 85 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Y_RNA.579-201ENST00000390939 94 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 RNU6-159P-201ENST00000391080 106 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 AL033519.2-201ENST00000403958 392 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 RNU6-1156P-201ENST00000410365 100 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.37□□□□□ -2.03
USP38Q8NB14 AC009237.7-201ENST00000447357 229 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.37□□□□□ -2.03
USP38Q8NB14 RNU7-169P-201ENST00000459456 61 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.37□□□□□ -2.03
USP38Q8NB14 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.37□□□□□ -2.03
USP38Q8NB14 C8orf59P2-201ENST00000603441 271 ntBASIC2.37□□□□□ -2.03
USP38Q8NB14 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.37□□□□□ -2.03
USP38Q8NB14 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP38Q8NB14 SNORD115-8-201ENST00000363856 82 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 RNU6-280P-201ENST00000364145 104 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 RNU6-1305P-201ENST00000364353 104 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 SNORD31B-201ENST00000364977 69 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 SNORD115-38-201ENST00000365037 82 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 Y_RNA.364-201ENST00000365532 101 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 AC004866.1-201ENST00000411748 78 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.36□□□□□ -2.03
USP38Q8NB14 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.36□□□□□ -2.03
USP38Q8NB14 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 Y_RNA.661-201ENST00000516003 99 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 RNU6-699P-201ENST00000517081 110 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 AC022868.1-201ENST00000517767 391 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 RRN3P3-201ENST00000549207 578 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 SNORA4-201ENST00000584302 138 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 MIR4753-201ENST00000585119 83 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 AL133255.1-201ENST00000606374 441 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 AC130454.1-201ENST00000622948 401 ntBASIC2.36□□□□□ -2.03
USP38Q8NB14 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP38Q8NB14 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
USP38Q8NB14 Y_RNA.61-201ENST00000362835 102 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNY3P11-201ENST00000364153 102 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNU6-879P-201ENST00000364328 108 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 Y_RNA.577-201ENST00000384794 101 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 MIR583-201ENST00000384846 75 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 MIR10B-201ENST00000385011 110 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RPL21P1-201ENST00000399532 476 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U3.40-201ENST00000408706 208 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNU2-2P-201ENST00000410396 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 Y_RNA.605-201ENST00000410577 105 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.35□□□□□ -2.03
USP38Q8NB14 AC114482.1-201ENST00000418010 247 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 MRPS18CP6-201ENST00000423587 223 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AL445646.1-201ENST00000431784 216 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AC027575.1-201ENST00000481064 460 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.35□□□□□ -2.03
USP38Q8NB14 RNU6-1114P-201ENST00000516022 107 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 MIR514B-201ENST00000516774 80 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNA5SP480-201ENST00000516840 109 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AP005660.1-201ENST00000522972 293 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AC093023.1-201ENST00000547375 507 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.15-201ENST00000611544 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.16-201ENST00000613119 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.12-201ENST00000613778 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.20-201ENST00000613956 192 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.9-201ENST00000615427 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.11-201ENST00000616345 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.2-201ENST00000616535 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.3-201ENST00000617785 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.19-201ENST00000618602 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 RNU2-1-201ENST00000618664 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
USP38Q8NB14 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP38Q8NB14 RNU6-490P-201ENST00000362985 107 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 RNU6-797P-201ENST00000363101 109 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 RNU6-137P-201ENST00000363680 108 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 Y_RNA.179-201ENST00000363844 90 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 RNU6-245P-201ENST00000384020 107 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 Y_RNA.557-201ENST00000384680 107 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 AC139712.2-201ENST00000424302 339 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 SUB1P3-201ENST00000564581 315 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.34□□□□□ -2.03
USP38Q8NB14 AC090617.3-201ENST00000573670 475 ntBASIC2.34□□□□□ -2.03
USP38Q8NB14 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms