Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 Y_RNA.473-201ENST00000384333 102 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 RNU6-18P-201ENST00000384527 107 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 RNA5SP504-201ENST00000410676 117 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 RNU6-57P-201ENST00000411348 103 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC060773.1-201ENST00000421698 310 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC074290.1-201ENST00000448883 135 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 HMGN2P23-201ENST00000456759 269 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC027575.1-201ENST00000481064 460 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC011406.1-201ENST00000512440 370 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 SNORA25.14-201ENST00000516481 132 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 RNU6-344P-201ENST00000516635 111 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC134698.4-201ENST00000523451 826 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 UBL5P4-201ENST00000562584 236 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC018462.2-201ENST00000605375 395 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.39□□□□□ -2.19
SKA3Q8IX90 AC006001.4-201ENST00000622243 395 ntBASIC1.39□□□□□ -2.19
SKA3Q8IX90 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
SKA3Q8IX90 CASC19-280ENST00000642102 1351 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 Y_RNA.48-201ENST00000362710 103 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 RNU6-112P-201ENST00000363599 104 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 Y_RNA.184-201ENST00000363884 108 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 SNORA67.2-201ENST00000384300 149 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 RNU6-601P-201ENST00000384540 107 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 MIR548K-201ENST00000408406 116 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 AC107399.1-201ENST00000451226 265 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 AC008834.1-201ENST00000511612 175 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 RNU6-1198P-201ENST00000516904 67 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 CBX3P8-201ENST00000532412 525 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.38□□□□□ -2.19
SKA3Q8IX90 AC010900.2-201ENST00000604508 210 ntBASIC1.38□□□□□ -2.19
SKA3Q8IX90 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
SKA3Q8IX90 MTND4P12-201ENST00000498999 1377 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU6-222P-201ENST00000362438 107 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.160-201ENST00000363677 92 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU6-595P-201ENST00000363944 107 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU1-96P-201ENST00000364163 162 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU6-593P-201ENST00000364716 112 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.405-201ENST00000383979 100 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.451-201ENST00000384200 100 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.490-201ENST00000384413 102 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.524-201ENST00000384564 100 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.561-201ENST00000384694 100 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 MIR934-201ENST00000401241 83 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AL033519.2-201ENST00000403958 392 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AL117342.1-201ENST00000404861 406 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Y_RNA.594-201ENST00000410373 140 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 MTND1P2-201ENST00000430604 821 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.37□□□□□ -2.19
SKA3Q8IX90 snoU13.23-201ENST00000458863 104 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RN7SKP210-201ENST00000459176 261 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AP000870.1-201ENST00000472927 406 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNU6-948P-201ENST00000516374 107 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AC015712.3-201ENST00000559380 164 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
SKA3Q8IX90 AC005668.1-201ENST00000571142 476 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.37□□□□□ -2.19
SKA3Q8IX90 AL353149.1-201ENST00000610667 244 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.37□□□□□ -2.19
SKA3Q8IX90 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.37□□□□□ -2.19
SKA3Q8IX90 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-661P-201ENST00000362409 107 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 snoU2-30.2-201ENST00000362805 70 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-727P-201ENST00000363592 107 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-137P-201ENST00000363680 108 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-280P-201ENST00000364145 104 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 SNORD87-201ENST00000364849 89 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-296P-201ENST00000384608 107 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNA5SP213-201ENST00000391031 106 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-159P-201ENST00000391080 106 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU6-876P-201ENST00000391295 104 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC074085.1-201ENST00000413598 418 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 USMG5P1-201ENST00000425964 177 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 MTND3P23-201ENST00000431980 347 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC245047.4-201ENST00000433189 144 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU7-57P-201ENST00000459540 60 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC091179.3-201ENST00000474761 144 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC026782.1-201ENST00000512952 449 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 RNU7-175P-201ENST00000515915 61 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 Y_RNA.670-201ENST00000516255 105 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 Y_RNA.706-201ENST00000516933 99 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 MIR5695-201ENST00000579717 85 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC016925.2-201ENST00000605108 242 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AL355802.3-201ENST00000607571 545 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC122108.2-201ENST00000611946 526 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 MIR6715A-201ENST00000615929 79 ntBASIC1.36□□□□□ -2.19
SKA3Q8IX90 AC126177.8-201ENST00000618339 1015 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms