Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC027119.1-201ENST00000440877 241 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 MTND2P22-201ENST00000444325 1033 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 MTND1P1-201ENST00000445453 368 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC009237.7-201ENST00000447357 229 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC007215.1-201ENST00000464893 276 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC011406.1-201ENST00000512440 370 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 RNU6-948P-201ENST00000516374 107 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 RNU2-34P-201ENST00000516534 121 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 MTND1P35-201ENST00000526739 508 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC103591.3-201ENST00000608684 209 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AL133215.3-201ENST00000609801 448 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 DISC2.1-201ENST00000612827 205 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 AC126177.8-201ENST00000618339 1015 ntBASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
CDKL3Q8IVW4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 SNORD1A-201ENST00000364968 72 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RNU6-128P-201ENST00000383976 107 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RNU6-908P-201ENST00000410160 94 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 AC069257.2-201ENST00000441819 155 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 NFU1P2-201ENST00000448700 469 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RNU7-187P-201ENST00000458985 68 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RPL23AP75-201ENST00000491601 451 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 AC016957.1-201ENST00000534895 309 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 MIR7111-201ENST00000619751 72 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 SCARNA4-201ENST00000629045 128 ntBASIC1.1□□□□□ -2.23
CDKL3Q8IVW4 MTND4P5-201ENST00000435821 1374 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 MTND5P35-201ENST00000557537 1720 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC027514.1-201ENST00000588561 1603 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 SNORA63D-201ENST00000364359 132 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 RNU6-975P-201ENST00000384296 105 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 RNU6-790P-201ENST00000384479 105 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AL161935.2-201ENST00000414627 60 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 MTCO3P29-201ENST00000432119 779 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 Z83846.1-201ENST00000446798 265 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 RNU6-498P-201ENST00000459468 107 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC114982.1-201ENST00000469402 321 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC024909.2-201ENST00000553035 286 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 ZNF519P2-201ENST00000557032 169 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AL353149.1-201ENST00000610667 244 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC048344.4-201ENST00000619744 527 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 AC091895.1-201ENST00000624494 256 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 MIR338-201ENST00000636369 67 ntBASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDKL3Q8IVW4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
CDKL3Q8IVW4 ZNF204P-201ENST00000416749 2397 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 SNORD50.1-201ENST00000362987 71 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.194-201ENST00000363985 102 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 AL353572.1-201ENST00000442490 417 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 HMGN2P26-201ENST00000463169 339 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 MIR3937-201ENST00000580135 106 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 AP003465.2-201ENST00000602571 373 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 AC137590.2-201ENST00000619709 240 ntBASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.38-201ENST00000362617 102 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 RNU6-451P-201ENST00000362921 107 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.256-201ENST00000364594 104 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms