Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AL356292.1-201ENST00000283110 373 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 MIR423-201ENST00000362201 94 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RNA5SP125-201ENST00000364843 120 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.328-201ENST00000365208 113 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RNU6-573P-201ENST00000383938 106 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 SNORA51.5-201ENST00000384126 131 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.549-201ENST00000384657 102 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 SNORA12-201ENST00000391162 147 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 MIR873-201ENST00000401120 77 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RNU2-55P-201ENST00000411146 174 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 HMGN2P31-201ENST00000432430 273 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 snoU13.22-201ENST00000459428 104 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC107626.1-201ENST00000471084 183 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC084357.1-201ENST00000473404 255 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RNU6-63P-201ENST00000516690 95 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 HMGN2P15-201ENST00000585707 270 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC005972.2-201ENST00000604690 348 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC009831.4-201ENST00000620744 325 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 MIR1245B-201ENST00000636115 69 ntBASIC3.26□□□□□ -1.89
ATG4DQ86TL0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AC004944.1-201ENST00000517807 3059 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.52-201ENST00000362760 96 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.163-201ENST00000363702 113 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 SNORD12C-201ENST00000386307 89 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 MIR1185-2-201ENST00000408687 86 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 RNU2-70P-201ENST00000410718 179 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 RPL23AP62-201ENST00000463396 453 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AP000873.1-201ENST00000463987 400 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 Vault.1-201ENST00000516474 102 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AL160236.1-201ENST00000556317 195 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AC007012.1-201ENST00000567192 175 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 RPS15AP11-201ENST00000594193 385 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.25□□□□□ -1.89
ATG4DQ86TL0 AL136360.1-201ENST00000503377 1900 ntBASIC3.25□□□□□ -1.89
ATG4DQ86TL0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 SNORA63.1-201ENST00000362493 131 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.85-201ENST00000363014 111 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 RNU6-674P-201ENST00000363831 107 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 SNORA7.2-201ENST00000364446 145 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 MIR488-201ENST00000365739 83 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.528-201ENST00000384575 108 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 RN7SL330P-201ENST00000469709 307 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 AC027419.1-201ENST00000522976 328 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 AC012314.7-201ENST00000619693 93 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 AP003355.3-201ENST00000623465 114 ntBASIC3.24□□□□□ -1.89
ATG4DQ86TL0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATG4DQ86TL0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 FAM35BP-202ENST00000497389 3337 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 SNORD9-201ENST00000362566 104 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RNA5SP119-201ENST00000362715 117 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RNU2-32P-201ENST00000411193 191 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RHEBP3-201ENST00000411920 351 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RPS29P4-201ENST00000414733 161 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AL021397.1-201ENST00000451806 248 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 SNORA18.4-201ENST00000516440 124 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RNU7-116P-201ENST00000516940 62 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AC103988.1-201ENST00000566382 2177 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AC008739.3-201ENST00000603262 127 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
ATG4DQ86TL0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4DQ86TL0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 USP8P1-201ENST00000494673 3183 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4DQ86TL0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORD114-7-201ENST00000362520 77 ntBASIC3.22□□□□□ -1.89
ATG4DQ86TL0 SNORA27.1-201ENST00000362604 124 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms