Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 MIR4273-201ENST00000582824 84 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC010928.2-201ENST00000588017 287 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC005034.5-201ENST00000604219 466 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC009994.1-201ENST00000606889 253 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC005520.5-201ENST00000613926 164 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 MTND5P9-201ENST00000503854 1755 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 SNORD114-26-201ENST00000363543 72 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNY3P14-201ENST00000384309 102 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNU6-601P-201ENST00000384540 107 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNU11-3P-201ENST00000391111 133 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNA5SP465-201ENST00000391195 109 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 MIR1283-2-201ENST00000408621 87 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RPL37P10-201ENST00000412884 288 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 MTND3P10-201ENST00000450967 341 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNU2-44P-201ENST00000516795 194 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 AL121579.1-201ENST00000555129 305 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 AC018462.2-201ENST00000605375 395 ntBASIC1.95□□□□□ -2.1
NPHP3Q7Z494 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.95□□□□□ -2.1
NPHP3Q7Z494 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.354-201ENST00000365448 111 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 MIR597-201ENST00000384968 97 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.594-201ENST00000410373 140 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 RNU6-1304P-201ENST00000411374 106 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 EIF4EP2-201ENST00000422816 654 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 RPL7P42-201ENST00000481005 679 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AC093259.1-201ENST00000509755 300 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 RNU6-1016P-201ENST00000516689 94 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP3Q7Z494 MIR5696-201ENST00000578474 85 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AC016727.2-201ENST00000603988 621 ntBASIC1.94□□□□□ -2.1
NPHP3Q7Z494 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP3Q7Z494 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPHP3Q7Z494 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPHP3Q7Z494 U8.1-201ENST00000362843 134 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 MIR1304-201ENST00000408243 91 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 RNU6-1050P-201ENST00000410388 107 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AC091951.2-201ENST00000500762 203 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 RNU6-507P-201ENST00000516045 100 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.691-201ENST00000516611 103 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 RNU6-1098P-201ENST00000516772 96 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 RNU6-1213P-201ENST00000517075 94 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
NPHP3Q7Z494 CBX3P8-201ENST00000532412 525 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.93□□□□□ -2.1
NPHP3Q7Z494 MIR548S-201ENST00000581352 82 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AL109918.3-201ENST00000603072 338 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AC009229.3-201ENST00000608056 282 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.2-201ENST00000362330 96 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 RNU6-596P-201ENST00000365395 98 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPHP3Q7Z494 SNORA18.2-201ENST00000383865 132 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.404-201ENST00000383978 102 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 RNU6-331P-201ENST00000384724 107 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 MIR32-201ENST00000384965 70 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 HMGN2P18-201ENST00000450680 270 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 OR2AQ1P-201ENST00000451972 200 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.92□□□□□ -2.1
NPHP3Q7Z494 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 UBE2V2P2-201ENST00000587677 504 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 MIR6779-201ENST00000617283 64 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 SCARNA4-201ENST00000629045 128 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.92□□□□□ -2.1
NPHP3Q7Z494 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.142-201ENST00000363491 102 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.482-201ENST00000384377 111 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC243428.1-201ENST00000421099 264 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AL445305.1-201ENST00000432577 575 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RPL30P10-201ENST00000488148 337 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNA5SP384-201ENST00000516615 116 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC105029.1-201ENST00000520250 669 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms