Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 MIR95-201ENST00000385072 81 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 RNA5SP20-201ENST00000515976 84 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 RNU2-34P-201ENST00000516534 121 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 AC023632.4-201ENST00000517783 191 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 AC022695.1-201ENST00000522089 237 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 AL137849.1-201ENST00000604767 169 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 MIR548AY-201ENST00000617669 107 ntBASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
NLRC3Q7RTR2 MIR367-201ENST00000362299 68 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU1-23P-201ENST00000363361 144 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU6-743P-201ENST00000364151 106 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU4-84P-201ENST00000364200 139 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 U8.7-201ENST00000364940 136 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU6-1130P-201ENST00000365434 107 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU6-449P-201ENST00000383914 107 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 SNORD116-13-201ENST00000384408 92 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 Y_RNA.572-201ENST00000384757 98 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU6-578P-201ENST00000390980 103 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU2-63P-201ENST00000410792 194 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 EBAG9P1-201ENST00000418955 543 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC010409.1-201ENST00000487382 476 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC117454.1-201ENST00000491120 168 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RNU7-115P-201ENST00000516433 55 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 RN7SKP282-201ENST00000516824 299 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 SNORA48.11-201ENST00000517015 89 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC087499.8-201ENST00000578406 226 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 MIR4724-201ENST00000579485 89 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 MIR5688-201ENST00000580619 83 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AL356280.1-201ENST00000603614 379 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AC006435.5-201ENST00000624486 112 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AL161912.2-201ENST00000565707 3007 ntBASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
NLRC3Q7RTR2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 RNU6-704P-201ENST00000364162 103 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 MIR616-201ENST00000385293 97 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 RNU6-1007P-201ENST00000516586 107 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 PRELID2P1-201ENST00000552837 301 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NLRC3Q7RTR2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AL356292.1-201ENST00000283110 373 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 SNORD50.2-201ENST00000365465 70 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 MIR134-201ENST00000385258 73 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AC006989.1-201ENST00000427212 131 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 RPL23AP58-201ENST00000440453 469 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AL137159.1-201ENST00000452808 512 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AC010531.2-201ENST00000465012 153 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 RNA5SP208-201ENST00000516156 78 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AC006130.2-201ENST00000586202 326 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NLRC3Q7RTR2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NLRC3Q7RTR2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NLRC3Q7RTR2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
NLRC3Q7RTR2 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 SNORA36B-201ENST00000410438 131 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 RN7SKP27-201ENST00000410684 333 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AC016909.1-201ENST00000415916 166 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AC010154.1-201ENST00000425857 269 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 CR769767.1-201ENST00000436337 346 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AL133547.1-201ENST00000448546 220 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AC245047.8-201ENST00000456455 284 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 RN7SL601P-201ENST00000471221 293 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 RPL36AP21-201ENST00000490372 323 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 SCARNA8-201ENST00000515924 131 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 RNU6-453P-201ENST00000516819 85 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 MIR4431-201ENST00000579990 94 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AP003357.1-201ENST00000604497 148 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AC005972.2-201ENST00000604690 348 ntBASIC3.15□□□□□ -1.91
NLRC3Q7RTR2 AL355297.2-201ENST00000604792 129 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms