Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-928P-201ENST00000516876 104 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AC091144.1-201ENST00000519573 138 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.42□□□□□ -2.02
USP43Q70EL4 SNORD113-5-201ENST00000607261 78 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AC110079.1-202ENST00000635213 138 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AC100821.1-201ENST00000523153 2479 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
USP43Q70EL4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.42□□□□□ -2.02
USP43Q70EL4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USP43Q70EL4 RNU6-222P-201ENST00000362438 107 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 RNU1-100P-201ENST00000365255 165 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 SNORD116-18-201ENST00000383961 92 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 RNU6-1289P-201ENST00000384431 106 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 Y_RNA.590-201ENST00000410140 107 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AL035461.1-201ENST00000421490 332 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC010154.1-201ENST00000425857 269 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 MTCO1P5-201ENST00000433573 344 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC016700.2-201ENST00000446011 156 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC010099.1-201ENST00000455434 375 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 RPS27P26-201ENST00000494583 239 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC091959.1-201ENST00000495857 238 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 RNA5SP272-201ENST00000516095 111 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 SNORA31.21-201ENST00000517180 77 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AK6P2-201ENST00000549020 471 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 RPL21P9-201ENST00000556149 474 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
USP43Q70EL4 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 MIR4782-201ENST00000577987 79 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC103810.1-201ENST00000579873 453 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 SCARNA4-201ENST00000629045 128 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 U6.99-201ENST00000637524 83 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 AC241585.2-209ENST00000638217 143 ntBASIC2.41□□□□□ -2.02
USP43Q70EL4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.41□□□□□ -2.02
USP43Q70EL4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
USP43Q70EL4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
USP43Q70EL4 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 RNU6-653P-201ENST00000363074 106 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.215-201ENST00000364204 112 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.217-201ENST00000364214 105 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 RNU4-9P-201ENST00000364951 139 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 RNU6-17P-201ENST00000384245 107 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 RNU6-18P-201ENST00000384527 107 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 MIR186-201ENST00000384988 86 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
USP43Q70EL4 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.4□□□□□ -2.03
USP43Q70EL4 UQCRBP2-201ENST00000447827 297 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 snoU13.30-201ENST00000458951 104 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.641-201ENST00000459414 105 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 TOMM22P6-201ENST00000465035 409 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
USP43Q70EL4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.4□□□□□ -2.03
USP43Q70EL4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.4□□□□□ -2.03
USP43Q70EL4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 Y_RNA.706-201ENST00000516933 99 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 AP004607.1-201ENST00000524456 203 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 LINC00933-203ENST00000559812 219 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.4□□□□□ -2.03
USP43Q70EL4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.4□□□□□ -2.03
USP43Q70EL4 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.4□□□□□ -2.03
USP43Q70EL4 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
USP43Q70EL4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP43Q70EL4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP43Q70EL4 RNU1-105P-201ENST00000363470 161 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 SNORD115-32-201ENST00000364079 82 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 Y_RNA.218-201ENST00000364218 104 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 Y_RNA.273-201ENST00000364703 102 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RNU1-73P-201ENST00000383971 164 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RNU6-926P-201ENST00000384075 107 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 Y_RNA.488-201ENST00000384403 102 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RNU6-417P-201ENST00000384712 107 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 MIR569-201ENST00000385228 96 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP43Q70EL4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP43Q70EL4 RPL26P27-201ENST00000414397 437 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AC092427.1-202ENST00000430569 476 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AL591043.1-201ENST00000432461 424 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP43Q70EL4 AC243964.1-201ENST00000441814 261 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AC009237.7-201ENST00000447357 229 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.39□□□□□ -2.03
USP43Q70EL4 AC010409.1-201ENST00000487382 476 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RPL30P1-201ENST00000488676 339 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RPL23AP75-201ENST00000491601 451 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 Y_RNA.679-201ENST00000516416 91 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 RNU6-426P-201ENST00000516464 97 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
USP43Q70EL4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.39□□□□□ -2.03
USP43Q70EL4 MIR6134-201ENST00000617606 109 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms