Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Y_RNA.562-201ENST00000384695 113 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 AL390729.2-201ENST00000416137 156 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 AC022018.1-201ENST00000430685 241 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 RPL23AP3-201ENST00000453844 468 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MTND1P19-201ENST00000511780 315 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 SCARNA24.2-201ENST00000516968 130 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3128-201ENST00000581957 66 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 AL109918.3-201ENST00000603072 338 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 MIR3674-201ENST00000636576 68 ntBASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTCHD4Q6ZW05 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 AC096644.4-201ENST00000563417 2912 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 MIR335-201ENST00000362173 94 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-545P-201ENST00000362681 104 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-1305P-201ENST00000364353 104 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.331-201ENST00000365267 102 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-1264P-201ENST00000383891 107 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-1310P-201ENST00000384153 107 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.489-201ENST00000384410 101 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-851P-201ENST00000384565 107 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNA5SP475-201ENST00000410568 110 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 EEF1B2P7-201ENST00000451177 676 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 CYP2C59P-201ENST00000457790 269 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RPS29P26-201ENST00000477483 171 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 HMGB3P17-201ENST00000504195 649 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 ATP5EP1-201ENST00000510257 156 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-966P-201ENST00000516479 104 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 SCARNA13-201ENST00000516672 275 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 AC022441.3-201ENST00000605737 136 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 AC006001.4-201ENST00000622243 395 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 AC127459.3-201ENST00000624328 466 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 MIR3651-201ENST00000630427 90 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 IGHVIII-44-202ENST00000636235 289 ntBASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PTCHD4Q6ZW05 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 RNU1-23P-201ENST00000363361 144 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 MIR95-201ENST00000385072 81 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 SNORA48.5-201ENST00000391143 135 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 RN7SKP27-201ENST00000410684 333 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 RPL23AP36-201ENST00000413895 458 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 AC139712.2-201ENST00000424302 339 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.673-201ENST00000516306 88 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 AC008749.1-201ENST00000597650 306 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 MIR8057-201ENST00000620957 69 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 AC008873.1-201ENST00000625051 138 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 MIR1248-201ENST00000629190 106 ntBASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PTCHD4Q6ZW05 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 MIR410-201ENST00000362222 80 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.60-201ENST00000362831 98 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNA5SP240-201ENST00000365355 128 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.446-201ENST00000384178 104 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 MIR586-201ENST00000385035 97 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 MIR548B-201ENST00000385247 97 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU2-63P-201ENST00000410792 194 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 AC005042.3-201ENST00000453230 174 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 MTND4LP30-201ENST00000454092 297 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 HMGN2P9-201ENST00000476875 229 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNA5SP341-201ENST00000516261 117 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-388P-201ENST00000517012 105 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-389P-201ENST00000517048 105 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 AC010900.2-201ENST00000604508 210 ntBASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
PTCHD4Q6ZW05 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 U3.8-201ENST00000363675 217 ntBASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-454P-201ENST00000364292 107 ntBASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 RNU6-1318P-201ENST00000365389 103 ntBASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 Y_RNA.569-201ENST00000384749 103 ntBASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 AC108059.2-201ENST00000434626 151 ntBASIC2.48□□□□□ -2.01
PTCHD4Q6ZW05 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms