Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CASC4Q6P4E1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 RPS20P15-201ENST00000412792 311 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AC016909.1-201ENST00000415916 166 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 HMGN2P34-201ENST00000437647 269 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AP000870.1-201ENST00000472927 406 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.67□□□□□ -2.14
CASC4Q6P4E1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 RNU7-175P-201ENST00000515915 61 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AC134698.4-201ENST00000523451 826 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 CBX3P8-201ENST00000532412 525 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AC011494.1-201ENST00000596454 237 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 7SK.7-201ENST00000603504 247 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 AC018462.2-201ENST00000605375 395 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 snoZ196.1-201ENST00000625269 89 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CASC4Q6P4E1 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
CASC4Q6P4E1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CASC4Q6P4E1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 RNU1-62P-201ENST00000362599 164 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 MIR548B-201ENST00000385247 97 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 CST2P1-201ENST00000425770 87 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 HSPE1P9-201ENST00000440046 311 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AC007677.1-201ENST00000445757 515 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 RN7SKP210-201ENST00000459176 261 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AC091179.3-201ENST00000474761 144 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AC026782.1-201ENST00000512952 449 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 AK6P2-201ENST00000549020 471 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 MIR4255-201ENST00000579351 72 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.66□□□□□ -2.14
CASC4Q6P4E1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
CASC4Q6P4E1 RNU6-727P-201ENST00000363592 107 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 MIR10B-201ENST00000385011 110 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC007098.1-201ENST00000420122 367 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 RPS3AP52-201ENST00000435639 297 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC027575.1-201ENST00000481064 460 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC025465.3-201ENST00000510570 311 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.65□□□□□ -2.15
CASC4Q6P4E1 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC011712.1-201ENST00000588959 234 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC016925.2-201ENST00000605108 242 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AL355802.3-201ENST00000607571 545 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC092794.1-201ENST00000612734 582 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.65□□□□□ -2.15
CASC4Q6P4E1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CASC4Q6P4E1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.15
CASC4Q6P4E1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.64□□□□□ -2.15
CASC4Q6P4E1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CASC4Q6P4E1 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 RNU6-280P-201ENST00000364145 104 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 SNORA63D-201ENST00000364359 132 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 MIR504-201ENST00000385065 83 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 MTND3P23-201ENST00000431980 347 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.64□□□□□ -2.15
CASC4Q6P4E1 RNU6-221P-201ENST00000459541 99 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 AC025647.1-201ENST00000517879 253 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 U6atac.1-201ENST00000616025 117 ntBASIC1.64□□□□□ -2.15
CASC4Q6P4E1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
CASC4Q6P4E1 RNU6-222P-201ENST00000362438 107 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 RNU6-793P-201ENST00000384233 104 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 RNU6-417P-201ENST00000384712 107 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 RNU2-7P-201ENST00000410794 178 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 AC074085.1-201ENST00000413598 418 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.63□□□□□ -2.15
CASC4Q6P4E1 USMG5P1-201ENST00000425964 177 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
CASC4Q6P4E1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms