Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 SNORA27.4-201ENST00000516650 95 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 MTND1P36-201ENST00000522384 936 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 MIR3165-201ENST00000579874 75 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC012507.3-201ENST00000603556 477 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 RPL17P51-201ENST00000605218 238 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AL445264.1-201ENST00000621719 171 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 MIR544A-201ENST00000384855 91 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AL354692.1-201ENST00000423044 315 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC007969.2-201ENST00000441891 191 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC007000.2-201ENST00000442564 487 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC093850.1-201ENST00000454121 251 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AP000870.1-201ENST00000472927 406 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC093303.1-201ENST00000514549 295 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC007684.1-201ENST00000609671 477 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 AC093875.1-201ENST00000623688 504 ntBASIC-1.31□□□□□ -2.62
CCDC18Q5T9S5 MIR760-201ENST00000390220 80 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AC106883.1-201ENST00000418805 562 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AL627311.1-201ENST00000431514 115 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AC005042.3-201ENST00000453230 174 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 RNU6-953P-201ENST00000459154 107 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 RPL17P19-201ENST00000489069 552 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AC107401.1-201ENST00000503426 685 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 MRPS36P4-201ENST00000534436 298 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AC064872.1-201ENST00000604823 1072 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 AL355073.2-201ENST00000612106 557 ntBASIC-1.32□□□□□ -2.62
CCDC18Q5T9S5 SNORD114-11-201ENST00000363738 75 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 DEFB131D-201ENST00000526803 184 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 DEFB131C-201ENST00000528817 165 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 ZNF321P-202ENST00000550843 495 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 AL133153.1-201ENST00000557756 303 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 SNORD98-201ENST00000636377 67 ntBASIC-1.33□□□□□ -2.62
CCDC18Q5T9S5 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 CDK8P2-201ENST00000415020 547 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 RNU6-948P-201ENST00000516374 107 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 AL162726.3-218ENST00000636401 95 ntBASIC-1.34□□□□□ -2.62
CCDC18Q5T9S5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 RNU6-343P-201ENST00000364709 104 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 RNU6-395P-201ENST00000365662 106 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 RNU6-817P-201ENST00000391083 104 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 MIR1305-201ENST00000408300 86 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 RNU2-3P-201ENST00000410144 191 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 AC006366.1-201ENST00000422002 759 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 AC068792.1-201ENST00000621354 417 ntBASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.35□□□□□ -2.63
CCDC18Q5T9S5 RNU6-545P-201ENST00000362681 104 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 RNU6-701P-201ENST00000384059 107 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 SNORA3B-201ENST00000391305 131 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 ZNF885P-201ENST00000420174 1098 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 AC018462.2-201ENST00000605375 395 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 SNORA28-201ENST00000606769 126 ntBASIC-1.36□□□□□ -2.63
CCDC18Q5T9S5 RNU6-216P-201ENST00000363282 104 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 MIR1253-201ENST00000408273 105 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 SNORD100-201ENST00000408573 76 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AL590135.1-201ENST00000422215 156 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC019205.3-201ENST00000424573 156 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC016700.2-201ENST00000446011 156 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC015911.1-201ENST00000495111 156 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RN7SKP164-201ENST00000516138 266 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 TMF1P1-201ENST00000576058 373 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 MIR4263-201ENST00000584745 83 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC246785.4-201ENST00000605374 287 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC006504.8-201ENST00000621046 635 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 U6.108-201ENST00000637764 58 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RNU6-40P-201ENST00000384254 107 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RNU7-12P-201ENST00000516030 62 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RNU6-180P-201ENST00000516697 61 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.37□□□□□ -2.63
CCDC18Q5T9S5 RNU1-76P-201ENST00000362903 159 ntBASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 RNU6-424P-201ENST00000384367 105 ntBASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 RNU6-24P-201ENST00000384440 107 ntBASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 RNA5SP201-201ENST00000410316 124 ntBASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.38□□□□□ -2.63
CCDC18Q5T9S5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
CCDC18Q5T9S5 SNORA36.1-201ENST00000363424 132 ntBASIC-1.39□□□□□ -2.63
CCDC18Q5T9S5 SNORA27.3-201ENST00000364937 134 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms