Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Y_RNA.61-201ENST00000362835 102 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 U3.8-201ENST00000363675 217 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 SNORD87-201ENST00000364849 89 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC38Q502W7 U3.40-201ENST00000408706 208 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 AC008413.1-201ENST00000511864 177 ntBASIC2.36□□□□□ -2.03
CCDC38Q502W7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC38Q502W7 AL159152.1-201ENST00000635019 2587 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC38Q502W7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC38Q502W7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC38Q502W7 MTND4P28-201ENST00000426217 387 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 AC016717.1-201ENST00000448918 286 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 RNU6-976P-201ENST00000516086 111 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 RN7SKP49-201ENST00000516675 260 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 SNORD116.3-201ENST00000517176 78 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 AC005786.1-201ENST00000588553 154 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.35□□□□□ -2.03
CCDC38Q502W7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC38Q502W7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC38Q502W7 RNU6-797P-201ENST00000363101 109 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 MIR548B-201ENST00000385247 97 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 TRBV12-1-201ENST00000479785 344 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AC027575.1-201ENST00000481064 460 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC38Q502W7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC38Q502W7 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AC002984.1-201ENST00000591692 448 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AC083806.3-201ENST00000614016 455 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 snoZ196.1-201ENST00000625269 89 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
CCDC38Q502W7 AC008555.8-201ENST00000623602 2168 ntBASIC2.34□□□□□ -2.04
CCDC38Q502W7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.34□□□□□ -2.04
CCDC38Q502W7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC38Q502W7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC38Q502W7 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 RNA5SP361-201ENST00000362686 118 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 AC096920.1-201ENST00000423991 241 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC38Q502W7 RNU6-911P-201ENST00000516523 104 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 SUMO2P18-201ENST00000518873 252 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC38Q502W7 AK6P2-201ENST00000549020 471 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 AL050343.2-201ENST00000607338 280 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 AC091925.1-201ENST00000623204 462 ntBASIC2.33□□□□□ -2.04
CCDC38Q502W7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC38Q502W7 AL359851.1-201ENST00000569460 4997 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.32□□□□□ -2.04
CCDC38Q502W7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC38Q502W7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC38Q502W7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RNU4-42P-201ENST00000364738 142 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RNU6-318P-201ENST00000384283 103 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RNU6-57P-201ENST00000411348 103 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 OOSP1P1-201ENST00000423265 274 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RNU7-169P-201ENST00000459456 61 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 RNA5SP24-201ENST00000516478 95 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 AL080274.1-201ENST00000605565 220 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC38Q502W7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 ZNF702P-202ENST00000434269 1966 ntBASIC2.32□□□□□ -2.04
CCDC38Q502W7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 Y_RNA.460-201ENST00000384255 102 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AL512604.1-201ENST00000404812 257 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 MIR1185-2-201ENST00000408687 86 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 RNA5SP501-201ENST00000410990 112 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC060773.1-201ENST00000421698 310 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC007677.1-201ENST00000445757 515 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 UQCRBP2-201ENST00000447827 297 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 PCNPP5-201ENST00000452246 481 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC38Q502W7 RNU6-221P-201ENST00000459541 99 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC074133.1-201ENST00000515696 183 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC38Q502W7 U2.1-201ENST00000618978 145 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms