Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.56□□□□□ -2.16
CKAP4Q07065 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.56□□□□□ -2.16
CKAP4Q07065 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.56□□□□□ -2.16
CKAP4Q07065 SNORA48.11-201ENST00000517015 89 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 RNU6-586P-201ENST00000517265 104 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CKAP4Q07065 EIF4A1P12-201ENST00000551910 141 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AC027288.2-201ENST00000553028 243 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 HSBP1P1-201ENST00000555205 166 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 MIR4435-1-201ENST00000582552 80 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AL356055.1-201ENST00000602528 446 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AC087588.2-201ENST00000617667 426 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AC008121.3-201ENST00000618726 433 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.56□□□□□ -2.16
CKAP4Q07065 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.56□□□□□ -2.16
CKAP4Q07065 RNU6-944P-201ENST00000364023 107 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 RNU1-115P-201ENST00000365329 160 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 MIR487A-201ENST00000385009 80 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 SNORA40.19-201ENST00000390846 128 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 MIR208B-201ENST00000401172 77 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 RNA5SP508-201ENST00000411327 119 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.55□□□□□ -2.16
CKAP4Q07065 PMCHL1-202ENST00000423102 261 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 CBX3P6-201ENST00000430257 527 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 AC099799.1-201ENST00000439809 192 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 Y_RNA.631-201ENST00000459607 101 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 RNU6-1153P-201ENST00000516760 105 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 Y_RNA.706-201ENST00000516933 99 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 RNA5SP54-201ENST00000516951 92 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.55□□□□□ -2.16
CKAP4Q07065 AL670379.2-201ENST00000604983 252 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 AC138305.3-201ENST00000624988 240 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
CKAP4Q07065 BX322639.1-202ENST00000423987 2213 ntBASIC1.55□□□□□ -2.16
CKAP4Q07065 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.55□□□□□ -2.16
CKAP4Q07065 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.319-201ENST00000365138 92 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 SNORA25B-201ENST00000365507 128 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.364-201ENST00000365532 101 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.428-201ENST00000384078 102 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.445-201ENST00000384168 102 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR625-201ENST00000385047 85 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU6-159P-201ENST00000391080 106 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 SNORA12-201ENST00000391162 147 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU6-1093P-201ENST00000391194 107 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU1-139P-201ENST00000391307 165 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1302-11-201ENST00000408051 138 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR548P-201ENST00000408336 84 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1302-9-201ENST00000408365 138 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1302-10-201ENST00000408734 138 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.597-201ENST00000410463 100 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU2-48P-201ENST00000410694 191 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 AC005534.2-201ENST00000431047 433 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 TOMM22P6-201ENST00000465035 409 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 AC105758.1-201ENST00000506038 399 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU6-1198P-201ENST00000516904 67 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU7-4P-201ENST00000516961 62 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.711-201ENST00000516993 102 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 RNU6-58P-201ENST00000517143 103 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 SNORD116.3-201ENST00000517176 78 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
CKAP4Q07065 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.54□□□□□ -2.16
CKAP4Q07065 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.54□□□□□ -2.16
CKAP4Q07065 AC016727.2-201ENST00000603988 621 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1302-2-201ENST00000607096 138 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1244-1-201ENST00000612829 85 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 SCARNA15.3-201ENST00000626315 122 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 SCARNA4.1-201ENST00000628597 123 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1244-3-201ENST00000635744 85 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1244-2-201ENST00000636449 85 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 MIR1244-4-202ENST00000636813 85 ntBASIC1.54□□□□□ -2.16
CKAP4Q07065 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.54□□□□□ -2.16
CKAP4Q07065 Y_RNA.31-201ENST00000362574 102 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 RNU1-23P-201ENST00000363361 144 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CKAP4Q07065 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.53□□□□□ -2.16
CKAP4Q07065 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.53□□□□□ -2.16
CKAP4Q07065 AL590556.1-201ENST00000423231 483 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 AC092423.1-201ENST00000430165 186 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.53□□□□□ -2.16
CKAP4Q07065 CHEK2P4-201ENST00000450340 246 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 AP000870.1-201ENST00000472927 406 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 AC018868.1-201ENST00000491307 315 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.53□□□□□ -2.16
CKAP4Q07065 RNU4-77P-201ENST00000516692 156 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 AC034114.1-201ENST00000520293 285 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.53□□□□□ -2.16
CKAP4Q07065 AC090617.3-201ENST00000573670 475 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 MIR3171-201ENST00000584270 74 ntBASIC1.53□□□□□ -2.16
CKAP4Q07065 RPL17P51-201ENST00000605218 238 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms