Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX4Q06945 RPL30P14-201ENST00000482744 348 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 RNA5SP76-201ENST00000516277 87 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 RNU7-115P-201ENST00000516433 55 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 AC026241.1-201ENST00000517873 2142 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 AC090049.2-201ENST00000550377 109 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 AP001486.2-201ENST00000561652 5113 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 MIR548AY-201ENST00000617669 107 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 MIR8057-201ENST00000620957 69 ntBASIC3.57□□□□□ -1.84
SOX4Q06945 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX4Q06945 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SOX4Q06945 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX4Q06945 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX4Q06945 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX4Q06945 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX4Q06945 RNU6-915P-201ENST00000364943 103 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 RNU1-57P-201ENST00000384491 166 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 MIR483-201ENST00000385070 76 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 AP000567.1-201ENST00000406413 156 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 AC010099.1-201ENST00000455434 375 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 RNU7-23P-201ENST00000459465 62 ntBASIC3.56□□□□□ -1.84
SOX4Q06945 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX4Q06945 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX4Q06945 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX4Q06945 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX4Q06945 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX4Q06945 CENPCP1-201ENST00000533085 2578 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 SNORD114-7-201ENST00000362520 77 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 RNA5SP295-201ENST00000362655 121 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 RNA5SP374-201ENST00000362939 125 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 Y_RNA.124-201ENST00000363339 93 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 RNU6-198P-201ENST00000384258 104 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 RNU6-476P-201ENST00000384726 107 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 MIR586-201ENST00000385035 97 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 RNU6-750P-201ENST00000390946 107 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 MIR1185-2-201ENST00000408687 86 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 AC126124.2-201ENST00000413542 321 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 CYCSP49-201ENST00000420810 319 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 AC112771.1-201ENST00000463581 102 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 MIR2276-201ENST00000516886 89 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 AL031274.2-201ENST00000599419 203 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX4Q06945 MIR6129-201ENST00000616087 109 ntBASIC3.55□□□□□ -1.84
SOX4Q06945 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SOX4Q06945 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX4Q06945 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX4Q06945 AC000403.1-201ENST00000613696 3585 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX4Q06945 RNU6-1082P-201ENST00000364574 107 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 RNU6-1144P-201ENST00000384247 104 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 MIR518C-201ENST00000384822 101 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 Y_RNA.622-201ENST00000411091 108 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 AP002884.2-201ENST00000471647 395 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
SOX4Q06945 Y_RNA.712-201ENST00000517011 92 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 AP000867.2-201ENST00000532468 320 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX4Q06945 AC127455.1-201ENST00000565496 145 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 RPL17P51-201ENST00000605218 238 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 AC002076.2-201ENST00000617362 122 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.54□□□□□ -1.84
SOX4Q06945 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX4Q06945 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SOX4Q06945 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX4Q06945 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX4Q06945 SNORA48.2-201ENST00000390926 124 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX4Q06945 RPL23AP7-203ENST00000449021 469 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 SNRPGP8-201ENST00000454064 226 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 CENPBD1P1-201ENST00000464061 469 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 CYCTP-201ENST00000504253 315 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 RNU6-1337P-201ENST00000516525 95 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX4Q06945 CYCSP26-201ENST00000534107 320 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 MIR5004-201ENST00000579078 107 ntBASIC3.53□□□□□ -1.84
SOX4Q06945 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SOX4Q06945 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SOX4Q06945 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX4Q06945 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
SOX4Q06945 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SOX4Q06945 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SOX4Q06945 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SOX4Q06945 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX4Q06945 RNU6-1298P-201ENST00000362456 101 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 SNORD45.3-201ENST00000363836 72 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 Y_RNA.294-201ENST00000364916 102 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 SNORA51.4-201ENST00000364993 124 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 RNU6-597P-201ENST00000365620 102 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 MIR23A-201ENST00000385245 73 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 MIR873-201ENST00000401120 77 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AL512604.1-201ENST00000404812 257 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AL355796.1-201ENST00000406706 323 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 MIR1278-201ENST00000408753 81 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 RNA5SP229-201ENST00000410809 99 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX4Q06945 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AC107934.2-201ENST00000518653 310 ntBASIC3.52□□□□□ -1.85
SOX4Q06945 AC090142.3-201ENST00000519012 385 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms