Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RNU6-25P-201ENST00000383873 107 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RNU6-48P-201ENST00000384161 107 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RNU6-15P-201ENST00000384534 107 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RNU6-29P-201ENST00000384637 107 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 AC114491.1-201ENST00000416095 246 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RNU7-57P-201ENST00000459540 60 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RPS3AP17-201ENST00000472594 777 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 RN7SKP164-201ENST00000516138 266 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 AC023157.2-201ENST00000540596 141 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 AC023050.3-201ENST00000541142 333 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 MTND4LP25-201ENST00000570218 163 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 MIR5006-201ENST00000583027 110 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 AC007684.1-201ENST00000609671 477 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 snoZ196.1-201ENST00000625269 89 ntBASIC-0.42□□□□□ -2.48
HIST1H1AQ02539 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 MIR526A1-201ENST00000384897 85 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 MIR520G-201ENST00000385064 90 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 MIR520H-201ENST00000385126 88 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 MIR610-201ENST00000385139 96 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AL353777.1-201ENST00000425552 326 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 MED13P1-201ENST00000428342 171 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AC009237.7-201ENST00000447357 229 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AC091874.1-201ENST00000511402 339 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 RNU7-28P-201ENST00000516759 62 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.43□□□□□ -2.48
HIST1H1AQ02539 RNA5SP128-201ENST00000365305 116 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC004386.2-201ENST00000441858 148 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC013828.2-201ENST00000532487 235 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC123904.2-201ENST00000548059 300 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 RBM11P1-201ENST00000604951 799 ntBASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.44□□□□□ -2.48
HIST1H1AQ02539 RNU6-369P-201ENST00000362515 102 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 MIR145-201ENST00000384967 88 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 SNORA75.6-201ENST00000391318 127 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 PDCL2P1-201ENST00000419302 352 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 AL590632.1-201ENST00000424289 371 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 AL355994.1-201ENST00000424379 260 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 USP9YP29-201ENST00000445112 563 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 RNU6-221P-201ENST00000459541 99 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 RNU1-117P-201ENST00000517041 158 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 RNU6-201P-201ENST00000517100 61 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 AC024060.1-201ENST00000607052 494 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 U6.73-201ENST00000619194 103 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 SNORA43.4-201ENST00000629559 138 ntBASIC-0.45□□□□□ -2.48
HIST1H1AQ02539 SNORA9.1-201ENST00000362412 131 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNU6-723P-201ENST00000383973 107 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNU6-298P-201ENST00000390888 96 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 MRPS10P2-201ENST00000431226 381 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 HSFY5P-201ENST00000453726 309 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNA5SP94-201ENST00000516917 108 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC107934.1-201ENST00000522215 217 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC022784.5-201ENST00000522241 437 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 MTND3P13-201ENST00000574391 343 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 MIR548AO-201ENST00000579992 96 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC008521.1-201ENST00000587471 187 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC112187.2-201ENST00000604345 283 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AC121334.2-201ENST00000605387 271 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNU4-5P-201ENST00000607255 135 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 MIR8076-201ENST00000611401 83 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 AL356596.1-201ENST00000624230 379 ntBASIC-0.46□□□□□ -2.48
HIST1H1AQ02539 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 RNA5SP48-201ENST00000363969 126 ntBASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 MIR4743-201ENST00000584576 69 ntBASIC-0.47□□□□□ -2.48
HIST1H1AQ02539 AC121333.1-201ENST00000567488 2709 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 RNU6-654P-201ENST00000364373 107 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.48□□□□□ -2.49
HIST1H1AQ02539 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms