Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL163973.1-201ENST00000484753 577 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC079382.1-201ENST00000493346 557 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU6-782P-201ENST00000516852 104 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC021451.1-201ENST00000523498 1129 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 MRPS36P4-201ENST00000534436 298 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 VN1R87P-201ENST00000596706 487 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC006157.1-201ENST00000611750 366 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 MIR6755-201ENST00000619993 66 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AL359697.1-201ENST00000624879 587 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 U4.7-201ENST00000638126 106 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 MTND5P32-201ENST00000560711 1802 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU6-424P-201ENST00000384367 105 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 SNORA2B-201ENST00000384583 137 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU4-46P-201ENST00000410818 138 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AP000870.1-201ENST00000472927 406 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCN7AQ01118 MIR5697-201ENST00000578045 78 ntBASIC-0.62□□□□□ -2.51
SCN7AQ01118 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.62□□□□□ -2.51
SCN7AQ01118 RNU6-371P-201ENST00000364283 108 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 SNORA1.1-201ENST00000364671 133 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 RNU6-384P-201ENST00000364900 104 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 RNU6-650P-201ENST00000365658 111 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 RNU6-756P-201ENST00000383997 107 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 SNORD65.1-201ENST00000390889 71 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 RNU2-62P-201ENST00000410868 191 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 SNORD83.1-201ENST00000411362 77 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 MTND3P17-201ENST00000416968 344 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.63□□□□□ -2.51
SCN7AQ01118 AC119751.4-201ENST00000507498 357 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 IGKV1-22-201ENST00000524313 326 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 AP001372.4-201ENST00000524889 472 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.63□□□□□ -2.51
SCN7AQ01118 AC092447.9-201ENST00000603395 144 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 RNU6-94P-201ENST00000607728 107 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.63□□□□□ -2.51
SCN7AQ01118 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.63□□□□□ -2.51
SCN7AQ01118 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 U3.4-201ENST00000363352 213 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 SNORA33-201ENST00000363664 130 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 RNU6-652P-201ENST00000365488 107 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 MTCO1P17-201ENST00000411522 491 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN7AQ01118 SNX3P1X-201ENST00000414887 175 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.64□□□□□ -2.51
SCN7AQ01118 AC010975.2-201ENST00000427781 588 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 HSFY7P-201ENST00000432672 318 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 HSFY8P-201ENST00000437934 318 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.64□□□□□ -2.51
SCN7AQ01118 RNU7-28P-201ENST00000516759 62 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 AC009994.1-201ENST00000606889 253 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 SNORA25.18-201ENST00000607153 114 ntBASIC-0.64□□□□□ -2.51
SCN7AQ01118 AC083799.1-201ENST00000366451 910 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 SNORA8.2-201ENST00000384372 139 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 MIR601-201ENST00000385256 79 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 MIR891A-201ENST00000401237 79 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 MIR548H2-201ENST00000408874 88 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL590135.1-201ENST00000422215 156 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC019205.3-201ENST00000424573 156 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL353997.1-201ENST00000432936 108 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC016700.2-201ENST00000446011 156 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC093850.1-201ENST00000454121 251 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC015911.1-201ENST00000495111 156 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.65□□□□□ -2.51
SCN7AQ01118 RNU7-99P-201ENST00000516271 62 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 RPL23AP91-201ENST00000569211 455 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL445435.1-201ENST00000604232 665 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL136221.1-201ENST00000621449 509 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC131159.1-201ENST00000621854 213 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.65□□□□□ -2.51
SCN7AQ01118 RPL17P19-201ENST00000489069 552 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC011921.3-201ENST00000605540 361 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AL450270.1-201ENST00000606160 391 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 AC104458.1-201ENST00000608243 463 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
SCN7AQ01118 RNU6-934P-201ENST00000365154 107 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 RNU6-946P-201ENST00000383878 107 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 AL158050.1-201ENST00000416077 457 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 MTND4LP7-201ENST00000431728 294 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 AL133396.1-201ENST00000432048 687 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.66□□□□□ -2.52
SCN7AQ01118 RNU2-10P-201ENST00000516375 211 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 RNU6-567P-201ENST00000516746 107 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 RNA5SP94-201ENST00000516917 108 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 RBM11P1-201ENST00000604951 799 ntBASIC-0.66□□□□□ -2.52
SCN7AQ01118 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.67□□□□□ -2.52
SCN7AQ01118 MIR520C-201ENST00000385005 87 ntBASIC-0.67□□□□□ -2.52
SCN7AQ01118 RPL23AP30-201ENST00000432419 501 ntBASIC-0.67□□□□□ -2.52
SCN7AQ01118 MTND4P15-201ENST00000437913 1033 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms