Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CBX1P83916 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CBX1P83916 RNA5SP99-201ENST00000364020 114 ntBASIC1.19□□□□□ -2.22
CBX1P83916 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.19□□□□□ -2.22
CBX1P83916 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
CBX1P83916 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.19□□□□□ -2.22
CBX1P83916 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.19□□□□□ -2.22
CBX1P83916 PCMTD1P1-201ENST00000455560 355 ntBASIC1.19□□□□□ -2.22
CBX1P83916 snoU13.23-201ENST00000458863 104 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
CBX1P83916 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.19□□□□□ -2.22
CBX1P83916 AC010525.2-201ENST00000590920 195 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AL359075.3-201ENST00000613288 217 ntBASIC1.19□□□□□ -2.22
CBX1P83916 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AC022079.1-201ENST00000621546 602 ntBASIC1.19□□□□□ -2.22
CBX1P83916 AC009033.1-201ENST00000624279 431 ntBASIC1.19□□□□□ -2.22
CBX1P83916 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
CBX1P83916 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CBX1P83916 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CBX1P83916 Y_RNA.151-201ENST00000363566 112 ntBASIC1.18□□□□□ -2.22
CBX1P83916 SNORD115-8-201ENST00000363856 82 ntBASIC1.18□□□□□ -2.22
CBX1P83916 RNU4-9P-201ENST00000364951 139 ntBASIC1.18□□□□□ -2.22
CBX1P83916 SNORD115-38-201ENST00000365037 82 ntBASIC1.18□□□□□ -2.22
CBX1P83916 Y_RNA.373-201ENST00000365600 103 ntBASIC1.18□□□□□ -2.22
CBX1P83916 MIR32-201ENST00000384965 70 ntBASIC1.18□□□□□ -2.22
CBX1P83916 RNA5SP504-201ENST00000410676 117 ntBASIC1.18□□□□□ -2.22
CBX1P83916 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.18□□□□□ -2.22
CBX1P83916 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.18□□□□□ -2.22
CBX1P83916 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.18□□□□□ -2.22
CBX1P83916 RN7SKP210-201ENST00000459176 261 ntBASIC1.18□□□□□ -2.22
CBX1P83916 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.18□□□□□ -2.22
CBX1P83916 MTCO2P30-201ENST00000503662 364 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AC103851.1-201ENST00000506833 274 ntBASIC1.18□□□□□ -2.22
CBX1P83916 RNU6-1281P-201ENST00000516223 105 ntBASIC1.18□□□□□ -2.22
CBX1P83916 RNU6-1198P-201ENST00000516904 67 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AL161670.1-201ENST00000554348 137 ntBASIC1.18□□□□□ -2.22
CBX1P83916 MIR4298-201ENST00000584380 73 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AL162413.1-201ENST00000603198 110 ntBASIC1.18□□□□□ -2.22
CBX1P83916 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.18□□□□□ -2.22
CBX1P83916 MZT1P2-201ENST00000604387 248 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
CBX1P83916 DISC2.1-201ENST00000612827 205 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
CBX1P83916 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.18□□□□□ -2.22
CBX1P83916 AC006504.8-201ENST00000621046 635 ntBASIC1.18□□□□□ -2.22
CBX1P83916 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CBX1P83916 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
CBX1P83916 SNORD115-32-201ENST00000364079 82 ntBASIC1.17□□□□□ -2.22
CBX1P83916 Y_RNA.372-201ENST00000365599 102 ntBASIC1.17□□□□□ -2.22
CBX1P83916 Z82205.1-201ENST00000428456 297 ntBASIC1.17□□□□□ -2.22
CBX1P83916 AL606517.2-201ENST00000442855 241 ntBASIC1.17□□□□□ -2.22
CBX1P83916 RPS27P1-201ENST00000450552 247 ntBASIC1.17□□□□□ -2.22
CBX1P83916 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
CBX1P83916 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
CBX1P83916 Y_RNA.665-201ENST00000516177 98 ntBASIC1.17□□□□□ -2.22
CBX1P83916 ZNF519P2-201ENST00000557032 169 ntBASIC1.17□□□□□ -2.22
CBX1P83916 POLR3GP2-201ENST00000588366 668 ntBASIC1.17□□□□□ -2.22
CBX1P83916 AC021506.2-201ENST00000612354 169 ntBASIC1.17□□□□□ -2.22
CBX1P83916 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.17□□□□□ -2.22
CBX1P83916 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
CBX1P83916 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CBX1P83916 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
CBX1P83916 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.16□□□□□ -2.22
CBX1P83916 AC010154.1-201ENST00000425857 269 ntBASIC1.16□□□□□ -2.22
CBX1P83916 Z82188.1-201ENST00000436709 154 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.16□□□□□ -2.22
CBX1P83916 TRBVA-201ENST00000498804 316 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC019235.1-201ENST00000503847 207 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.16□□□□□ -2.22
CBX1P83916 SNORA25.14-201ENST00000516481 132 ntBASIC1.16□□□□□ -2.22
CBX1P83916 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
CBX1P83916 RNU6-58P-201ENST00000517143 103 ntBASIC1.16□□□□□ -2.22
CBX1P83916 RNA5SP454-201ENST00000517231 127 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.16□□□□□ -2.22
CBX1P83916 TPRKBP2-201ENST00000565969 475 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.16□□□□□ -2.22
CBX1P83916 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.16□□□□□ -2.22
CBX1P83916 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
CBX1P83916 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
CBX1P83916 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
CBX1P83916 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.16□□□□□ -2.22
CBX1P83916 AL359757.2-201ENST00000624309 274 ntBASIC1.16□□□□□ -2.22
CBX1P83916 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.16□□□□□ -2.22
CBX1P83916 U6.108-201ENST00000637764 58 ntBASIC1.16□□□□□ -2.22
CBX1P83916 AC099654.12-201ENST00000639868 649 ntBASIC1.16□□□□□ -2.22
CBX1P83916 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CBX1P83916 RNU6-1252P-201ENST00000363054 104 ntBASIC1.15□□□□□ -2.23
CBX1P83916 Y_RNA.319-201ENST00000365138 92 ntBASIC1.15□□□□□ -2.23
CBX1P83916 SNORD116-1-201ENST00000384335 95 ntBASIC1.15□□□□□ -2.23
CBX1P83916 RNU6-95P-201ENST00000384697 107 ntBASIC1.15□□□□□ -2.23
CBX1P83916 RNU6-1031P-201ENST00000384773 107 ntBASIC1.15□□□□□ -2.23
CBX1P83916 MIR153-2-201ENST00000385225 87 ntBASIC1.15□□□□□ -2.23
CBX1P83916 MIR764-201ENST00000390811 85 ntBASIC1.15□□□□□ -2.23
CBX1P83916 Y_RNA.615-201ENST00000410769 117 ntBASIC1.15□□□□□ -2.23
CBX1P83916 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.23
CBX1P83916 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms