Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.44□□□□□ -2.02
RAE1P78406 ELOCP29-201ENST00000588193 334 ntBASIC2.44□□□□□ -2.02
RAE1P78406 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.44□□□□□ -2.02
RAE1P78406 AL109918.3-201ENST00000603072 338 ntBASIC2.44□□□□□ -2.02
RAE1P78406 AC011373.1-201ENST00000607270 237 ntBASIC2.44□□□□□ -2.02
RAE1P78406 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
RAE1P78406 MIR1248-201ENST00000629190 106 ntBASIC2.44□□□□□ -2.02
RAE1P78406 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.44□□□□□ -2.02
RAE1P78406 MIR3674-201ENST00000636576 68 ntBASIC2.44□□□□□ -2.02
RAE1P78406 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RAE1P78406 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RAE1P78406 Y_RNA.84-201ENST00000363011 104 ntBASIC2.43□□□□□ -2.02
RAE1P78406 SNORD81.1-201ENST00000363064 77 ntBASIC2.43□□□□□ -2.02
RAE1P78406 SNORD113-8-201ENST00000363497 74 ntBASIC2.43□□□□□ -2.02
RAE1P78406 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RNU6-1305P-201ENST00000364353 104 ntBASIC2.43□□□□□ -2.02
RAE1P78406 Y_RNA.288-201ENST00000364854 92 ntBASIC2.43□□□□□ -2.02
RAE1P78406 U8.9-201ENST00000365667 134 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RNU1-109P-201ENST00000383960 147 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RNU6-1310P-201ENST00000384153 107 ntBASIC2.43□□□□□ -2.02
RAE1P78406 Y_RNA.483-201ENST00000384380 101 ntBASIC2.43□□□□□ -2.02
RAE1P78406 MIR561-201ENST00000385216 97 ntBASIC2.43□□□□□ -2.02
RAE1P78406 MIR887-201ENST00000401258 79 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RNU6-1203P-201ENST00000410703 110 ntBASIC2.43□□□□□ -2.02
RAE1P78406 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.43□□□□□ -2.02
RAE1P78406 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.43□□□□□ -2.02
RAE1P78406 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
RAE1P78406 TRBVB-201ENST00000477100 408 ntBASIC2.43□□□□□ -2.02
RAE1P78406 AC098869.1-201ENST00000481627 292 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RPPH1-2P-201ENST00000516688 293 ntBASIC2.43□□□□□ -2.02
RAE1P78406 RNU6-570P-201ENST00000517051 105 ntBASIC2.43□□□□□ -2.02
RAE1P78406 AP002001.1-203ENST00000534002 267 ntBASIC2.43□□□□□ -2.02
RAE1P78406 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.43□□□□□ -2.02
RAE1P78406 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
RAE1P78406 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.43□□□□□ -2.02
RAE1P78406 SNORD113-5-201ENST00000607261 78 ntBASIC2.43□□□□□ -2.02
RAE1P78406 U4atac.1-201ENST00000618345 95 ntBASIC2.43□□□□□ -2.02
RAE1P78406 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RAE1P78406 RNU6-859P-201ENST00000362728 107 ntBASIC2.42□□□□□ -2.02
RAE1P78406 SNORA72.2-201ENST00000365028 127 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RNU6-1175P-201ENST00000365200 107 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RNU6-505P-201ENST00000384427 107 ntBASIC2.42□□□□□ -2.02
RAE1P78406 MIR215-201ENST00000384858 110 ntBASIC2.42□□□□□ -2.02
RAE1P78406 AL357139.1-201ENST00000407792 426 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RNU2-48P-201ENST00000410694 191 ntBASIC2.42□□□□□ -2.02
RAE1P78406 Y_RNA.618-201ENST00000410949 107 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RPL19P1-201ENST00000411635 428 ntBASIC2.42□□□□□ -2.02
RAE1P78406 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.42□□□□□ -2.02
RAE1P78406 AC025750.2-201ENST00000442609 450 ntBASIC2.42□□□□□ -2.02
RAE1P78406 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.42□□□□□ -2.02
RAE1P78406 AC114982.1-201ENST00000469402 321 ntBASIC2.42□□□□□ -2.02
RAE1P78406 SEPT14P8-201ENST00000508026 178 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RNU6-107P-201ENST00000516643 102 ntBASIC2.42□□□□□ -2.02
RAE1P78406 RNU7-110P-201ENST00000516891 62 ntBASIC2.42□□□□□ -2.02
RAE1P78406 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.42□□□□□ -2.02
RAE1P78406 AC055872.1-201ENST00000570978 278 ntBASIC2.42□□□□□ -2.02
RAE1P78406 AC022441.3-201ENST00000605737 136 ntBASIC2.42□□□□□ -2.02
RAE1P78406 AC127459.3-201ENST00000624328 466 ntBASIC2.42□□□□□ -2.02
RAE1P78406 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
RAE1P78406 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.42□□□□□ -2.02
RAE1P78406 RNU6-545P-201ENST00000362681 104 ntBASIC2.41□□□□□ -2.02
RAE1P78406 RNU4-90P-201ENST00000362773 141 ntBASIC2.41□□□□□ -2.02
RAE1P78406 SNORA80A-201ENST00000363922 136 ntBASIC2.41□□□□□ -2.02
RAE1P78406 RNU6-102P-201ENST00000384485 104 ntBASIC2.41□□□□□ -2.02
RAE1P78406 RNU6-21P-201ENST00000384710 107 ntBASIC2.41□□□□□ -2.02
RAE1P78406 MIR23A-201ENST00000385245 73 ntBASIC2.41□□□□□ -2.02
RAE1P78406 SNORA26.7-201ENST00000391288 122 ntBASIC2.41□□□□□ -2.02
RAE1P78406 Y_RNA.602-201ENST00000410535 92 ntBASIC2.41□□□□□ -2.02
RAE1P78406 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.41□□□□□ -2.02
RAE1P78406 RPL23AP83-201ENST00000434984 473 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC074290.1-201ENST00000448883 135 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC018868.1-201ENST00000491307 315 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
RAE1P78406 RNA5SP490-201ENST00000517141 136 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
RAE1P78406 EIF4BP1-201ENST00000554881 351 ntBASIC2.41□□□□□ -2.02
RAE1P78406 MIR4753-201ENST00000585119 83 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC062037.2-201ENST00000610137 73 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC091932.3-201ENST00000624223 323 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC006386.2-201ENST00000624491 75 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC012005.1-201ENST00000624575 75 ntBASIC2.41□□□□□ -2.02
RAE1P78406 AC009487.2-201ENST00000420969 6821 ntBASIC2.41□□□□□ -2.02
RAE1P78406 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
RAE1P78406 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RAE1P78406 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAE1P78406 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAE1P78406 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.4□□□□□ -2.02
RAE1P78406 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.02
RAE1P78406 RNU6-290P-201ENST00000365212 101 ntBASIC2.4□□□□□ -2.03
RAE1P78406 Y_RNA.541-201ENST00000384640 113 ntBASIC2.4□□□□□ -2.03
RAE1P78406 MT-TG-201ENST00000387429 68 ntBASIC2.4□□□□□ -2.03
RAE1P78406 RNU4-30P-201ENST00000410245 143 ntBASIC2.4□□□□□ -2.03
RAE1P78406 RNA5SP475-201ENST00000410568 110 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AC108938.1-201ENST00000451204 136 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AC005042.3-201ENST00000453230 174 ntBASIC2.4□□□□□ -2.03
RAE1P78406 HSPE1P25-201ENST00000455484 251 ntBASIC2.4□□□□□ -2.03
RAE1P78406 RNU6-826P-201ENST00000516827 104 ntBASIC2.4□□□□□ -2.03
RAE1P78406 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.4□□□□□ -2.03
RAE1P78406 AC023157.2-201ENST00000540596 141 ntBASIC2.4□□□□□ -2.03
RAE1P78406 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms