Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 MRPS36P4-201ENST00000534436 298 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.15□□□□□ -2.23
CCNA1P78396 SCOCP1-201ENST00000554676 349 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.15□□□□□ -2.23
CCNA1P78396 AC010620.1-201ENST00000601088 1102 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AC146944.4-201ENST00000602697 718 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AC005562.2-201ENST00000618264 111 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AL158209.2-201ENST00000619266 216 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.15□□□□□ -2.23
CCNA1P78396 AC009033.1-201ENST00000624279 431 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 MTND5P26-201ENST00000426018 1752 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 MIR373-201ENST00000362273 69 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 RNA5SP494-201ENST00000410653 129 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 RNU6-325P-201ENST00000411132 105 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.14□□□□□ -2.23
CCNA1P78396 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.14□□□□□ -2.23
CCNA1P78396 AL359672.1-201ENST00000442302 409 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 MTND3P16-201ENST00000452205 344 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 AC011406.1-201ENST00000512440 370 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 RNU6-405P-201ENST00000516637 110 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.14□□□□□ -2.23
CCNA1P78396 AL157687.1-201ENST00000554853 619 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 AC097520.1-201ENST00000624435 385 ntBASIC1.14□□□□□ -2.23
CCNA1P78396 RNU6-562P-201ENST00000362731 107 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU5B-2P-201ENST00000363036 113 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 Y_RNA.167-201ENST00000363735 109 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 SNORD116-9-201ENST00000384000 95 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 SNORD116-3-201ENST00000384287 95 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 SNORD116-7-201ENST00000384404 95 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 SNORD116-5-201ENST00000384462 95 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU6-950P-201ENST00000384651 107 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU6-331P-201ENST00000384724 107 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 MIR514A2-201ENST00000385131 88 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 MIR514A3-201ENST00000385132 88 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCNA1P78396 AL117342.1-201ENST00000404861 406 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU6-648P-201ENST00000410190 107 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU2-66P-201ENST00000410650 161 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.13□□□□□ -2.23
CCNA1P78396 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AF186996.7-201ENST00000492781 209 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.13□□□□□ -2.23
CCNA1P78396 RNU6-1332P-201ENST00000516666 104 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 RNU6-835P-201ENST00000516974 104 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AC016256.1-201ENST00000547971 354 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.13□□□□□ -2.23
CCNA1P78396 MIR4753-201ENST00000585119 83 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 AL365434.2-201ENST00000607979 234 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.13□□□□□ -2.23
CCNA1P78396 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCNA1P78396 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.12□□□□□ -2.23
CCNA1P78396 RNU6-1123P-201ENST00000362347 106 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 RNU6-1286P-201ENST00000383871 107 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 RNU6-1042P-201ENST00000384204 107 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 MIR521-1-201ENST00000384902 87 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 RNU6-780P-201ENST00000391030 104 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCNA1P78396 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 MIR1283-1-201ENST00000408494 87 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC004866.1-201ENST00000411748 78 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.12□□□□□ -2.23
CCNA1P78396 USP9YP14-201ENST00000430663 563 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.12□□□□□ -2.23
CCNA1P78396 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNA1P78396 AC004386.2-201ENST00000441858 148 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC073910.1-201ENST00000445047 438 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC098826.2-201ENST00000452011 651 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC114982.1-201ENST00000469402 321 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 RNU6-1146P-201ENST00000516282 102 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCNA1P78396 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.12□□□□□ -2.23
CCNA1P78396 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 MIR5006-201ENST00000583027 110 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 AC104458.1-201ENST00000608243 463 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 FAM157A-202ENST00000615155 405 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 OR5AK4P-201ENST00000635912 903 ntBASIC1.12□□□□□ -2.23
CCNA1P78396 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CCNA1P78396 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.12□□□□□ -2.23
CCNA1P78396 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CCNA1P78396 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCNA1P78396 Y_RNA.51-201ENST00000362725 102 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 RNU6-1085P-201ENST00000363576 107 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 Y_RNA.231-201ENST00000364358 102 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 MIR487A-201ENST00000385009 80 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 MTCO3P40-201ENST00000392516 676 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 CALM2P3-201ENST00000400429 449 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 MIR450B-201ENST00000401182 78 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AC060773.1-201ENST00000421698 310 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
CCNA1P78396 AC016717.1-201ENST00000448918 286 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.11□□□□□ -2.23
CCNA1P78396 AC083904.1-201ENST00000487828 231 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms