Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MIR98-201ENST00000606724 119 ntBASIC0.35□□□□□ -2.35
CXCR4P61073 U2.17-201ENST00000611454 95 ntBASIC0.35□□□□□ -2.35
CXCR4P61073 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.35□□□□□ -2.35
CXCR4P61073 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
CXCR4P61073 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
CXCR4P61073 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.34□□□□□ -2.36
CXCR4P61073 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 RNU2-29P-201ENST00000410423 189 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC092423.1-201ENST00000430165 186 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC009961.2-201ENST00000435771 251 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.34□□□□□ -2.36
CXCR4P61073 STAG3L5P-204ENST00000443759 179 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC233266.1-201ENST00000454518 96 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 U7.7-201ENST00000459276 60 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.34□□□□□ -2.36
CXCR4P61073 RPL39P5-202ENST00000512505 151 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC027419.1-201ENST00000522976 328 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 MIR5000-201ENST00000577717 103 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AL078603.1-201ENST00000603824 313 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC242852.1-201ENST00000612151 96 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
CXCR4P61073 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CXCR4P61073 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 RNU6-163P-201ENST00000384396 106 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 SNORD99-201ENST00000408612 74 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.33□□□□□ -2.36
CXCR4P61073 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.33□□□□□ -2.36
CXCR4P61073 AC004854.1-201ENST00000440356 349 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.33□□□□□ -2.36
CXCR4P61073 MTCO2P7-201ENST00000446518 666 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.33□□□□□ -2.36
CXCR4P61073 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.33□□□□□ -2.36
CXCR4P61073 RNU7-138P-201ENST00000459479 64 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 MTND1P8-201ENST00000571424 950 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 AL022161.1-201ENST00000604390 213 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 AC139792.3-201ENST00000623525 224 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
CXCR4P61073 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
CXCR4P61073 RNU6-424P-201ENST00000384367 105 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 SNORD73A-201ENST00000386062 65 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.32□□□□□ -2.36
CXCR4P61073 RPL31P35-201ENST00000431058 377 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.32□□□□□ -2.36
CXCR4P61073 RNU1-117P-201ENST00000517041 158 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.32□□□□□ -2.36
CXCR4P61073 FGF7P1-201ENST00000582820 288 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 AL512605.2-201ENST00000592972 256 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 AC004832.4-201ENST00000608952 331 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 AL391903.3-201ENST00000612158 163 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.32□□□□□ -2.36
CXCR4P61073 SCARNA4-201ENST00000629045 128 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
CXCR4P61073 RNU6-606P-201ENST00000384721 111 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CXCR4P61073 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.31□□□□□ -2.36
CXCR4P61073 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.31□□□□□ -2.36
CXCR4P61073 MTND3P9-201ENST00000429526 346 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.31□□□□□ -2.36
CXCR4P61073 TPT1P7-201ENST00000458300 517 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 MTND2P14-201ENST00000482139 351 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.31□□□□□ -2.36
CXCR4P61073 AL137161.1-201ENST00000532231 390 ntBASIC0.31□□□□□ -2.36
CXCR4P61073 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.31□□□□□ -2.36
CXCR4P61073 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.31□□□□□ -2.36
CXCR4P61073 RNU6-1237P-201ENST00000384777 107 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 SNORD89-201ENST00000390981 114 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 U8.16-201ENST00000391279 133 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 Z99497.1-201ENST00000421282 135 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 CALM2P4-201ENST00000430810 426 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.3□□□□□ -2.36
CXCR4P61073 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AC106038.2-201ENST00000520706 568 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 MRPS36P4-201ENST00000534436 298 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.3□□□□□ -2.36
CXCR4P61073 MIR548AB-201ENST00000584917 84 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 SNORD11B-201ENST00000607707 90 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AL391834.2-201ENST00000609982 546 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AL096861.1-201ENST00000610899 123 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 RMST_3.1-201ENST00000611651 109 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AC137590.2-201ENST00000619709 240 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 AC027514.1-201ENST00000588561 1603 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 ZNF204P-201ENST00000416749 2397 ntBASIC0.3□□□□□ -2.36
CXCR4P61073 RNU6-1266P-201ENST00000362794 105 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 Y_RNA.265-201ENST00000364677 108 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 RNU6-456P-201ENST00000384493 107 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 RNA5SP247-201ENST00000411181 105 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 MTCO2P34-201ENST00000421994 607 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCR4P61073 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CXCR4P61073 AC093850.1-201ENST00000454121 251 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCR4P61073 U8.21-201ENST00000459536 136 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 RNU7-12P-201ENST00000516030 62 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 RNA5SP220-201ENST00000516298 104 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 Y_RNA.676-201ENST00000516393 96 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms