Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ZNF72P-201ENST00000425869 1908 ntBASIC1.36□□□□□ -2.19
APOC4P55056 MTND4P12-201ENST00000498999 1377 ntBASIC1.35□□□□□ -2.19
APOC4P55056 RNU6-873P-201ENST00000363833 107 ntBASIC1.35□□□□□ -2.19
APOC4P55056 RNU6-1305P-201ENST00000364353 104 ntBASIC1.35□□□□□ -2.19
APOC4P55056 Y_RNA.482-201ENST00000384377 111 ntBASIC1.35□□□□□ -2.19
APOC4P55056 RPL21P111-201ENST00000418453 477 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AL445305.1-201ENST00000432577 575 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.35□□□□□ -2.19
APOC4P55056 AC107399.1-201ENST00000451226 265 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.35□□□□□ -2.19
APOC4P55056 RNU6-237P-201ENST00000515985 71 ntBASIC1.35□□□□□ -2.19
APOC4P55056 SNORA25.15-201ENST00000516487 89 ntBASIC1.35□□□□□ -2.19
APOC4P55056 Y_RNA.691-201ENST00000516611 103 ntBASIC1.35□□□□□ -2.19
APOC4P55056 RNA5SP384-201ENST00000516615 116 ntBASIC1.35□□□□□ -2.19
APOC4P55056 SUMO2P18-201ENST00000518873 252 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AC134698.4-201ENST00000523451 826 ntBASIC1.35□□□□□ -2.19
APOC4P55056 UBL5P4-201ENST00000562584 236 ntBASIC1.35□□□□□ -2.19
APOC4P55056 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.35□□□□□ -2.19
APOC4P55056 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
APOC4P55056 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
APOC4P55056 7SK.7-201ENST00000603504 247 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AC005014.2-201ENST00000607795 599 ntBASIC1.35□□□□□ -2.19
APOC4P55056 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.35□□□□□ -2.19
APOC4P55056 AC022306.2-201ENST00000617563 647 ntBASIC1.35□□□□□ -2.19
APOC4P55056 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
APOC4P55056 RNU1-62P-201ENST00000362599 164 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU6-862P-201ENST00000362804 105 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
APOC4P55056 SNORA16.1-201ENST00000364597 132 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU4-42P-201ENST00000364738 142 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU6-601P-201ENST00000384540 107 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU6-541P-201ENST00000384709 110 ntBASIC1.34□□□□□ -2.19
APOC4P55056 MIR10B-201ENST00000385011 110 ntBASIC1.34□□□□□ -2.19
APOC4P55056 MIR30A-201ENST00000385092 71 ntBASIC1.34□□□□□ -2.19
APOC4P55056 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
APOC4P55056 RPL37P10-201ENST00000412884 288 ntBASIC1.34□□□□□ -2.19
APOC4P55056 NCOR1P3-201ENST00000420479 303 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU7-57P-201ENST00000459540 60 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AC114982.1-201ENST00000469402 321 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AP000870.1-201ENST00000472927 406 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AC116353.2-201ENST00000505332 712 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AC103851.1-201ENST00000506833 274 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RNU6-1041P-201ENST00000516254 102 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AK6P2-201ENST00000549020 471 ntBASIC1.34□□□□□ -2.19
APOC4P55056 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.34□□□□□ -2.19
APOC4P55056 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
APOC4P55056 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.34□□□□□ -2.19
APOC4P55056 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.34□□□□□ -2.19
APOC4P55056 MIR502-201ENST00000606349 86 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
APOC4P55056 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AL353149.1-201ENST00000610667 244 ntBASIC1.34□□□□□ -2.19
APOC4P55056 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.34□□□□□ -2.19
APOC4P55056 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.34□□□□□ -2.19
APOC4P55056 AC084768.2-201ENST00000622736 221 ntBASIC1.34□□□□□ -2.19
APOC4P55056 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.34□□□□□ -2.19
APOC4P55056 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
APOC4P55056 SNORD81.2-201ENST00000365153 76 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RNU6-1283P-201ENST00000365314 105 ntBASIC1.33□□□□□ -2.2
APOC4P55056 Y_RNA.390-201ENST00000383932 102 ntBASIC1.33□□□□□ -2.2
APOC4P55056 Y_RNA.404-201ENST00000383978 102 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RNU6-296P-201ENST00000384608 107 ntBASIC1.33□□□□□ -2.2
APOC4P55056 MIR548B-201ENST00000385247 97 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RNA5SP213-201ENST00000391031 106 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RNU4-14P-201ENST00000410858 122 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.33□□□□□ -2.2
APOC4P55056 MTND3P23-201ENST00000431980 347 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
APOC4P55056 MTND3P10-201ENST00000450967 341 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RPL7P42-201ENST00000481005 679 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
APOC4P55056 Y_RNA.708-201ENST00000516950 96 ntBASIC1.33□□□□□ -2.2
APOC4P55056 SNORA31.17-201ENST00000516953 127 ntBASIC1.33□□□□□ -2.2
APOC4P55056 RNU1-117P-201ENST00000517041 158 ntBASIC1.33□□□□□ -2.2
APOC4P55056 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.33□□□□□ -2.2
APOC4P55056 MIR3122-201ENST00000577243 73 ntBASIC1.33□□□□□ -2.2
APOC4P55056 MIR3618-201ENST00000580330 88 ntBASIC1.33□□□□□ -2.2
APOC4P55056 MIR4769-201ENST00000584126 77 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AC009229.3-201ENST00000608056 282 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AL078596.1-201ENST00000624856 447 ntBASIC1.33□□□□□ -2.2
APOC4P55056 MIR338-201ENST00000636369 67 ntBASIC1.33□□□□□ -2.2
APOC4P55056 AC068205.3-201ENST00000636385 468 ntBASIC1.33□□□□□ -2.2
APOC4P55056 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
APOC4P55056 AC245060.5-201ENST00000610778 3293 ntBASIC1.32□□□□□ -2.2
APOC4P55056 Y_RNA.2-201ENST00000362330 96 ntBASIC1.32□□□□□ -2.2
APOC4P55056 RNU6-280P-201ENST00000364145 104 ntBASIC1.32□□□□□ -2.2
APOC4P55056 SNORD87-201ENST00000364849 89 ntBASIC1.32□□□□□ -2.2
APOC4P55056 RNA5SP138-201ENST00000365098 114 ntBASIC1.32□□□□□ -2.2
APOC4P55056 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
APOC4P55056 AC138393.2-201ENST00000414742 246 ntBASIC1.32□□□□□ -2.2
APOC4P55056 USMG5P1-201ENST00000425964 177 ntBASIC1.32□□□□□ -2.2
APOC4P55056 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.32□□□□□ -2.2
APOC4P55056 AC091179.3-201ENST00000474761 144 ntBASIC1.32□□□□□ -2.2
APOC4P55056 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.32□□□□□ -2.2
APOC4P55056 SNORA20.3-201ENST00000516880 132 ntBASIC1.32□□□□□ -2.2
APOC4P55056 AC105029.1-201ENST00000520250 669 ntBASIC1.32□□□□□ -2.2
APOC4P55056 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms