Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AP000907.4-201ENST00000604143 237 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 PRR13P7-201ENST00000605538 430 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AL133215.3-201ENST00000609801 448 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.15□□□□□ -2.23
CXCL12P48061 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.15□□□□□ -2.23
CXCL12P48061 MTND5P10-201ENST00000603719 1809 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.14□□□□□ -2.23
CXCL12P48061 RNU6-784P-201ENST00000384330 106 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 RNU6-95P-201ENST00000384697 107 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CXCL12P48061 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CXCL12P48061 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CXCL12P48061 MIR1283-1-201ENST00000408494 87 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 RPS26P42-201ENST00000413485 326 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 SDAD1P3-201ENST00000427380 333 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AL589823.1-201ENST00000429577 183 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 C8orf59P1-201ENST00000429930 303 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL12P48061 OR2AQ1P-201ENST00000451972 200 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 MTND1P11-201ENST00000456661 876 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 RNU7-66P-201ENST00000459469 62 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AC087477.1-201ENST00000465747 340 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AC005908.1-201ENST00000468701 347 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL12P48061 AC019176.1-201ENST00000518519 225 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 MTND1P35-201ENST00000526739 508 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.14□□□□□ -2.23
CXCL12P48061 AC016925.2-201ENST00000605108 242 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 TCL6_2.1-201ENST00000615162 119 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AC015540.1-201ENST00000615828 501 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL12P48061 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.14□□□□□ -2.23
CXCL12P48061 AC024614.3-201ENST00000637860 256 ntBASIC1.14□□□□□ -2.23
CXCL12P48061 SNORD50.1-201ENST00000362987 71 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RNU6-128P-201ENST00000383976 107 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RNU6-790P-201ENST00000384479 105 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 MIR30A-201ENST00000385092 71 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CXCL12P48061 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.13□□□□□ -2.23
CXCL12P48061 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.13□□□□□ -2.23
CXCL12P48061 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.13□□□□□ -2.23
CXCL12P48061 AC060773.1-201ENST00000421698 310 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
CXCL12P48061 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 MTCO3P18-201ENST00000440206 761 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL12P48061 AC016717.1-201ENST00000448918 286 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.13□□□□□ -2.23
CXCL12P48061 snoU13.30-201ENST00000458951 104 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RPL23AP75-201ENST00000491601 451 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AC067942.3-201ENST00000512025 362 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RNU6-856P-201ENST00000516959 98 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 RRN3P3-201ENST00000549207 578 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AC026470.2-201ENST00000561492 181 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.13□□□□□ -2.23
CXCL12P48061 AL138726.1-201ENST00000614873 333 ntBASIC1.13□□□□□ -2.23
CXCL12P48061 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
CXCL12P48061 RNU1-62P-201ENST00000362599 164 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 Y_RNA.318-201ENST00000365131 97 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 Y_RNA.554-201ENST00000384672 102 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 MIR300-201ENST00000401138 83 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 AL117342.1-201ENST00000404861 406 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 AC007215.1-201ENST00000464893 276 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 FO393415.2-201ENST00000480085 343 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 RNA5SP384-201ENST00000516615 116 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 MIR3672-201ENST00000584290 82 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 MIR4753-201ENST00000585119 83 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.12□□□□□ -2.23
CXCL12P48061 MIR7974-201ENST00000615835 79 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 AC126177.8-201ENST00000618339 1015 ntBASIC1.12□□□□□ -2.23
CXCL12P48061 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.12□□□□□ -2.23
CXCL12P48061 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.12□□□□□ -2.23
CXCL12P48061 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.12□□□□□ -2.23
CXCL12P48061 Y_RNA.205-201ENST00000364128 113 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 RNU6-338P-201ENST00000383888 105 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 Y_RNA.530-201ENST00000384587 101 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.11□□□□□ -2.23
CXCL12P48061 MTCO1P21-201ENST00000416634 589 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 MTND3P21-201ENST00000433774 331 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 Z82188.1-201ENST00000436709 154 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AL353572.1-201ENST00000442490 417 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC009237.7-201ENST00000447357 229 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 NFU1P2-201ENST00000448700 469 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC079354.2-201ENST00000453523 154 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 PCMTD1P1-201ENST00000455560 355 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 HMGN2P9-201ENST00000476875 229 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC105313.1-201ENST00000509121 353 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC011406.1-201ENST00000512440 370 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 RNU6-256P-201ENST00000516747 97 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 RNA5SP437-201ENST00000517249 129 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC109635.3-201ENST00000529536 185 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.11□□□□□ -2.23
CXCL12P48061 AC011712.1-201ENST00000588959 234 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms