Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL078596.1-201ENST00000624856 447 ntBASIC1.14□□□□□ -2.23
SSR1P43307 RNU1-22P-201ENST00000363334 158 ntBASIC1.13□□□□□ -2.23
SSR1P43307 SNORD113-7-201ENST00000363762 77 ntBASIC1.13□□□□□ -2.23
SSR1P43307 Y_RNA.373-201ENST00000365600 103 ntBASIC1.13□□□□□ -2.23
SSR1P43307 RNU6-214P-201ENST00000384130 107 ntBASIC1.13□□□□□ -2.23
SSR1P43307 MIR514A2-201ENST00000385131 88 ntBASIC1.13□□□□□ -2.23
SSR1P43307 MIR514A3-201ENST00000385132 88 ntBASIC1.13□□□□□ -2.23
SSR1P43307 SNORA12.1-201ENST00000390873 148 ntBASIC1.13□□□□□ -2.23
SSR1P43307 FGF7P8-201ENST00000402994 292 ntBASIC1.13□□□□□ -2.23
SSR1P43307 RNU6-1186P-201ENST00000410429 97 ntBASIC1.13□□□□□ -2.23
SSR1P43307 RPS26P42-201ENST00000413485 326 ntBASIC1.13□□□□□ -2.23
SSR1P43307 SNX2P2-201ENST00000424553 323 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AC007215.1-201ENST00000464893 276 ntBASIC1.13□□□□□ -2.23
SSR1P43307 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
SSR1P43307 MTCO1P29-201ENST00000496868 288 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.13□□□□□ -2.23
SSR1P43307 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.13□□□□□ -2.23
SSR1P43307 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AC025647.1-201ENST00000517879 253 ntBASIC1.13□□□□□ -2.23
SSR1P43307 MTND1P5-201ENST00000517906 940 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.13□□□□□ -2.23
SSR1P43307 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.13□□□□□ -2.23
SSR1P43307 AK6P2-201ENST00000549020 471 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.13□□□□□ -2.23
SSR1P43307 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.13□□□□□ -2.23
SSR1P43307 MIR4298-201ENST00000584380 73 ntBASIC1.13□□□□□ -2.23
SSR1P43307 RNU6-89P-201ENST00000606519 100 ntBASIC1.13□□□□□ -2.23
SSR1P43307 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
SSR1P43307 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
SSR1P43307 AC073534.2-201ENST00000620377 381 ntBASIC1.13□□□□□ -2.23
SSR1P43307 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
SSR1P43307 Y_RNA.77-201ENST00000362962 107 ntBASIC1.12□□□□□ -2.23
SSR1P43307 RNU6-784P-201ENST00000384330 106 ntBASIC1.12□□□□□ -2.23
SSR1P43307 RNU6-933P-201ENST00000384424 107 ntBASIC1.12□□□□□ -2.23
SSR1P43307 MIR32-201ENST00000384965 70 ntBASIC1.12□□□□□ -2.23
SSR1P43307 MIR586-201ENST00000385035 97 ntBASIC1.12□□□□□ -2.23
SSR1P43307 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SSR1P43307 EIF4E2P1-201ENST00000393781 255 ntBASIC1.12□□□□□ -2.23
SSR1P43307 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.12□□□□□ -2.23
SSR1P43307 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC079354.2-201ENST00000453523 154 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC114982.1-201ENST00000469402 321 ntBASIC1.12□□□□□ -2.23
SSR1P43307 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.12□□□□□ -2.23
SSR1P43307 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.12□□□□□ -2.23
SSR1P43307 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.12□□□□□ -2.23
SSR1P43307 RNU2-34P-201ENST00000516534 121 ntBASIC1.12□□□□□ -2.23
SSR1P43307 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC027419.1-201ENST00000522976 328 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.12□□□□□ -2.23
SSR1P43307 AC026371.1-201ENST00000551867 419 ntBASIC1.12□□□□□ -2.23
SSR1P43307 FRG2DP-202ENST00000566967 323 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC136932.1-201ENST00000574771 208 ntBASIC1.12□□□□□ -2.23
SSR1P43307 AC010525.2-201ENST00000590920 195 ntBASIC1.12□□□□□ -2.23
SSR1P43307 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.12□□□□□ -2.23
SSR1P43307 snoZ196.1-201ENST00000625269 89 ntBASIC1.12□□□□□ -2.23
SSR1P43307 RNU6-1322P-201ENST00000364309 107 ntBASIC1.11□□□□□ -2.23
SSR1P43307 RNU6-790P-201ENST00000384479 105 ntBASIC1.11□□□□□ -2.23
SSR1P43307 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SSR1P43307 RNU2-66P-201ENST00000410650 161 ntBASIC1.11□□□□□ -2.23
SSR1P43307 RPL30P16-201ENST00000419341 429 ntBASIC1.11□□□□□ -2.23
SSR1P43307 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.11□□□□□ -2.23
SSR1P43307 AC069257.2-201ENST00000441819 155 ntBASIC1.11□□□□□ -2.23
SSR1P43307 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.11□□□□□ -2.23
SSR1P43307 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
SSR1P43307 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
SSR1P43307 UBL5P4-201ENST00000562584 236 ntBASIC1.11□□□□□ -2.23
SSR1P43307 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.11□□□□□ -2.23
SSR1P43307 SNRPGP20-201ENST00000604477 205 ntBASIC1.11□□□□□ -2.23
SSR1P43307 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
SSR1P43307 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
SSR1P43307 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
SSR1P43307 OR4G1P-203ENST00000641984 1631 ntBASIC1.11□□□□□ -2.23
SSR1P43307 MTND4P5-201ENST00000435821 1374 ntBASIC1.1□□□□□ -2.23
SSR1P43307 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSR1P43307 RNU6-254P-201ENST00000363377 107 ntBASIC1.1□□□□□ -2.23
SSR1P43307 Y_RNA.231-201ENST00000364358 102 ntBASIC1.1□□□□□ -2.23
SSR1P43307 Y_RNA.415-201ENST00000384012 112 ntBASIC1.1□□□□□ -2.23
SSR1P43307 RNU6-1065P-201ENST00000384513 106 ntBASIC1.1□□□□□ -2.23
SSR1P43307 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
SSR1P43307 ZNF519P2-201ENST00000557032 169 ntBASIC1.1□□□□□ -2.23
SSR1P43307 MIR3664-201ENST00000579074 99 ntBASIC1.1□□□□□ -2.23
SSR1P43307 MIR5695-201ENST00000579717 85 ntBASIC1.1□□□□□ -2.23
SSR1P43307 AC010620.1-201ENST00000601088 1102 ntBASIC1.1□□□□□ -2.23
SSR1P43307 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
SSR1P43307 AL133215.3-201ENST00000609801 448 ntBASIC1.1□□□□□ -2.23
SSR1P43307 Z99129.1-201ENST00000612510 255 ntBASIC1.1□□□□□ -2.23
SSR1P43307 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.1□□□□□ -2.23
SSR1P43307 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.1□□□□□ -2.23
SSR1P43307 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSR1P43307 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SSR1P43307 RNU6-1085P-201ENST00000363576 107 ntBASIC1.09□□□□□ -2.23
SSR1P43307 MTCO3P40-201ENST00000392516 676 ntBASIC1.09□□□□□ -2.23
SSR1P43307 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
SSR1P43307 MTATP6P17-201ENST00000431030 672 ntBASIC1.09□□□□□ -2.23
SSR1P43307 MTND1P11-201ENST00000456661 876 ntBASIC1.09□□□□□ -2.23
SSR1P43307 AC092991.1-201ENST00000477176 376 ntBASIC1.09□□□□□ -2.23
SSR1P43307 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.09□□□□□ -2.23
SSR1P43307 Y_RNA.665-201ENST00000516177 98 ntBASIC1.09□□□□□ -2.23
SSR1P43307 RNU7-128P-201ENST00000517247 62 ntBASIC1.09□□□□□ -2.23
SSR1P43307 AC026407.1-201ENST00000518369 204 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms