Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 NDUFA5P4-201ENST00000436704 385 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 AC108729.3-201ENST00000513484 108 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 ZNF519P2-201ENST00000557032 169 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 NBR2-204ENST00000587322 63 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 AL162413.1-201ENST00000603198 110 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 DISC2.1-201ENST00000612827 205 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 FGF7P8-201ENST00000402994 292 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 RNU2-16P-201ENST00000410712 136 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 Y_RNA.615-201ENST00000410769 117 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.17□□□□□ -2.22
FDFT1P37268 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.17□□□□□ -2.22
FDFT1P37268 PCMTD1P1-201ENST00000455560 355 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 AC019235.1-201ENST00000503847 207 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.17□□□□□ -2.22
FDFT1P37268 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.17□□□□□ -2.22
FDFT1P37268 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.17□□□□□ -2.22
FDFT1P37268 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
FDFT1P37268 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 PIGPP4-201ENST00000584447 307 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 snoU13.31-201ENST00000607291 104 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 AC097065.2-201ENST00000608159 533 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.17□□□□□ -2.22
FDFT1P37268 SNORD50.1-201ENST00000362987 71 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 MIR515-2-201ENST00000384883 83 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 MIR515-1-201ENST00000384884 83 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 MIR32-201ENST00000384965 70 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 Y_RNA.595-201ENST00000410403 105 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 RPL23AP36-201ENST00000413895 458 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.16□□□□□ -2.22
FDFT1P37268 MTND1P29-201ENST00000448112 647 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.16□□□□□ -2.22
FDFT1P37268 RNU7-34P-201ENST00000459394 64 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 RPS26P45-201ENST00000471748 340 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 Y_RNA.665-201ENST00000516177 98 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 AL355802.3-201ENST00000607571 545 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.16□□□□□ -2.22
FDFT1P37268 AC099654.12-201ENST00000639868 649 ntBASIC1.16□□□□□ -2.22
FDFT1P37268 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
FDFT1P37268 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
FDFT1P37268 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 Y_RNA.287-201ENST00000364853 94 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 SNORA67.2-201ENST00000384300 149 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
FDFT1P37268 RNA5SP467-201ENST00000391274 118 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 BTF3P4-201ENST00000418852 495 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 MTND1P1-201ENST00000445453 368 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.15□□□□□ -2.23
FDFT1P37268 AL163540.1-201ENST00000485382 386 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 HMGN1P12-201ENST00000499125 195 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.15□□□□□ -2.23
FDFT1P37268 RNU6-344P-201ENST00000516635 111 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 RNA5SP54-201ENST00000516951 92 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.15□□□□□ -2.23
FDFT1P37268 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.15□□□□□ -2.23
FDFT1P37268 POLR3GP2-201ENST00000588366 668 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 AC092954.2-201ENST00000609103 430 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.15□□□□□ -2.23
FDFT1P37268 AC006504.8-201ENST00000621046 635 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 snoZ196.1-201ENST00000625269 89 ntBASIC1.15□□□□□ -2.23
FDFT1P37268 RNU6-534P-201ENST00000364877 106 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 Y_RNA.559-201ENST00000384686 107 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 RNU6-95P-201ENST00000384697 107 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 RNU6-908P-201ENST00000410160 94 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 RPL37P10-201ENST00000412884 288 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC004965.1-201ENST00000413033 213 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AP1B1P2-201ENST00000416196 106 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AL590632.1-201ENST00000424289 371 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 SNX2P2-201ENST00000424553 323 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.14□□□□□ -2.23
FDFT1P37268 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.14□□□□□ -2.23
FDFT1P37268 AC079354.2-201ENST00000453523 154 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AL163195.1-201ENST00000496941 348 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 MTCO2P30-201ENST00000503662 364 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.14□□□□□ -2.23
FDFT1P37268 MIR4498-201ENST00000577599 66 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
FDFT1P37268 SNORD11B-201ENST00000607707 90 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 AC008873.1-201ENST00000625051 138 ntBASIC1.14□□□□□ -2.23
FDFT1P37268 RNU4-9P-201ENST00000364951 139 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
FDFT1P37268 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.13□□□□□ -2.23
FDFT1P37268 AC016909.1-201ENST00000415916 166 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AC008134.1-201ENST00000420943 193 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.13□□□□□ -2.23
FDFT1P37268 Z82188.1-201ENST00000436709 154 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AC025647.1-201ENST00000517879 253 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 MTND1P5-201ENST00000517906 940 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AC024995.1-201ENST00000523014 93 ntBASIC1.13□□□□□ -2.23
FDFT1P37268 AL512310.8-201ENST00000550183 120 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms