Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC090615.1-201ENST00000577519 154 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 AL357080.1-201ENST00000617394 239 ntBASIC-1.61□□□□□ -2.67
CPS1P31327 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.61□□□□□ -2.67
CPS1P31327 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.62□□□□□ -2.67
CPS1P31327 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 ART2BP-201ENST00000453501 499 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
CPS1P31327 AC121334.2-201ENST00000605387 271 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 AL359075.3-201ENST00000613288 217 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 U6.101-201ENST00000637707 76 ntBASIC-1.62□□□□□ -2.67
CPS1P31327 AP000568.1-201ENST00000282964 442 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.63□□□□□ -2.67
CPS1P31327 AC007283.2-201ENST00000424739 197 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 AC093809.1-201ENST00000509155 340 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 RNU6-63P-201ENST00000516690 95 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 AC133485.4-201ENST00000561835 220 ntBASIC-1.63□□□□□ -2.67
CPS1P31327 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.63□□□□□ -2.67
CPS1P31327 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.63□□□□□ -2.67
CPS1P31327 RNU6-166P-201ENST00000384371 107 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 MRPL42P3-201ENST00000401492 326 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 AL122001.1-201ENST00000457027 370 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.64□□□□□ -2.67
CPS1P31327 SNORA18.7-201ENST00000516910 131 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 AC090502.2-201ENST00000549267 280 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 AC090897.1-201ENST00000580909 226 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 AC245008.1-201ENST00000608123 476 ntBASIC-1.64□□□□□ -2.67
CPS1P31327 RNU6-386P-201ENST00000362650 107 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 U8.5-201ENST00000364528 136 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 MLLT10P1-201ENST00000418346 262 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.65□□□□□ -2.67
CPS1P31327 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.65□□□□□ -2.67
CPS1P31327 AC092427.1-201ENST00000439177 601 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 AL050341.1-201ENST00000447743 313 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 RPS23P5-201ENST00000495419 428 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 AC091135.1-201ENST00000585943 307 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 AL136363.2-201ENST00000604173 851 ntBASIC-1.65□□□□□ -2.67
CPS1P31327 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 AL354692.1-201ENST00000423044 315 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.66□□□□□ -2.67
CPS1P31327 AL392103.1-201ENST00000447000 198 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 AC093850.1-201ENST00000454121 251 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 AC090572.1-201ENST00000519251 160 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 DPPA3P3-201ENST00000603842 430 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 AC063944.3-201ENST00000609969 533 ntBASIC-1.66□□□□□ -2.67
CPS1P31327 MIR421-201ENST00000365696 85 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 MIR525-201ENST00000384978 85 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 MIR873-201ENST00000401120 77 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 MTND1P21-201ENST00000412991 285 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 RNU6-274P-201ENST00000459566 107 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.66□□□□□ -2.68
CPS1P31327 Z99289.3-201ENST00000605586 594 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 FRG1KP-201ENST00000623592 341 ntBASIC-1.66□□□□□ -2.68
CPS1P31327 MTND5P17-201ENST00000418405 1603 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 RNU1-76P-201ENST00000362903 159 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 SNORD116-20-201ENST00000384529 92 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 AC244250.2-201ENST00000418731 148 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 AC245047.3-201ENST00000429428 127 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 RPS24P1-201ENST00000438550 371 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.67□□□□□ -2.68
CPS1P31327 RNU6-416P-201ENST00000516265 103 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 RNU6-143P-201ENST00000516942 93 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 AC109446.1-201ENST00000566172 220 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 MIR548AD-201ENST00000584780 82 ntBASIC-1.67□□□□□ -2.68
CPS1P31327 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 RNU6-934P-201ENST00000365154 107 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 RNA5SP117-201ENST00000365294 118 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.68□□□□□ -2.68
CPS1P31327 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.68□□□□□ -2.68
CPS1P31327 AC010468.3-201ENST00000508225 458 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 RNU6-1098P-201ENST00000516772 96 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.68□□□□□ -2.68
CPS1P31327 SCARNA4-201ENST00000629045 128 ntBASIC-1.68□□□□□ -2.68
CPS1P31327 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.69□□□□□ -2.68
CPS1P31327 MIR101-2-201ENST00000362195 79 ntBASIC-1.69□□□□□ -2.68
CPS1P31327 RNU6-417P-201ENST00000384712 107 ntBASIC-1.69□□□□□ -2.68
CPS1P31327 RNA5SP470-201ENST00000516463 106 ntBASIC-1.69□□□□□ -2.68
CPS1P31327 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 MIR501-201ENST00000390204 84 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
CPS1P31327 RNU6-613P-201ENST00000410412 108 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 VN1R10P-201ENST00000447106 875 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.7□□□□□ -2.68
CPS1P31327 snoU109.2-201ENST00000459316 135 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 RNU2-34P-201ENST00000516534 121 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 RNU1-142P-201ENST00000516682 145 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 AC095057.3-201ENST00000567102 1157 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 MIR3925-201ENST00000584674 77 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 AL139286.2-201ENST00000606838 396 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 AC008250.2-201ENST00000615261 205 ntBASIC-1.7□□□□□ -2.68
CPS1P31327 RNU6-424P-201ENST00000384367 105 ntBASIC-1.71□□□□□ -2.68
CPS1P31327 SNORD116-23-201ENST00000384645 92 ntBASIC-1.71□□□□□ -2.68
CPS1P31327 RNA5SP95-201ENST00000410319 137 ntBASIC-1.71□□□□□ -2.68
CPS1P31327 FCF1P9-201ENST00000412546 282 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms