Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MTCYBP4-201ENST00000401524 249 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 Y_RNA.594-201ENST00000410373 140 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1050P-201ENST00000410388 107 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RPS20P15-201ENST00000412792 311 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC096649.2-201ENST00000416186 393 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A1P20908 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A1P20908 HMGN2P10-201ENST00000448085 265 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A1P20908 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RPL36AP48-201ENST00000485521 314 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC018437.1-201ENST00000492214 406 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC114801.2-201ENST00000503825 781 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.21□□□□□ -2.22
COL5A1P20908 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 SNORA43.2-201ENST00000516652 128 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-307P-201ENST00000516743 106 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.21□□□□□ -2.22
COL5A1P20908 HSBP1P1-201ENST00000555205 166 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A1P20908 SUB1P4-201ENST00000566062 339 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 FRG2DP-202ENST00000566967 323 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC006600.1-201ENST00000572529 153 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 MIR3171-201ENST00000584270 74 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AL353621.2-201ENST00000605340 133 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC018889.1-201ENST00000605372 397 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 AC138627.2-201ENST00000624202 601 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
COL5A1P20908 Y_RNA.128-201ENST00000363391 112 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 Y_RNA.138-201ENST00000363462 102 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 RNU6-692P-201ENST00000384496 107 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 Y_RNA.577-201ENST00000384794 101 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AC008267.5-201ENST00000424928 265 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 RPL23AP50-201ENST00000434149 455 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AC007969.2-201ENST00000441891 191 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 GPM6BP3-201ENST00000442797 145 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A1P20908 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.2□□□□□ -2.22
COL5A1P20908 RNU6-1170P-201ENST00000515974 106 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 SCARNA16.2-201ENST00000516520 172 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 ACA59.2-201ENST00000517061 156 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AC093027.1-201ENST00000546698 429 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A1P20908 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A1P20908 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.2□□□□□ -2.22
COL5A1P20908 AL391813.1-201ENST00000603098 260 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 AC016925.2-201ENST00000605108 242 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 MTND4LP32-201ENST00000636111 270 ntBASIC1.2□□□□□ -2.22
COL5A1P20908 RNU6-227P-201ENST00000362865 103 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 Y_RNA.356-201ENST00000365475 113 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU6-738P-201ENST00000384531 106 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 Y_RNA.579-201ENST00000390939 94 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU6-750P-201ENST00000390946 107 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AL513475.1-201ENST00000406602 315 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 Y_RNA.646-201ENST00000410980 101 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 MTCYBP10-201ENST00000424905 650 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 USMG5P1-201ENST00000425964 177 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 SNORD19B-201ENST00000459623 84 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.19□□□□□ -2.22
COL5A1P20908 MRPS17P9-201ENST00000511924 393 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC093303.1-201ENST00000514549 295 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC105029.1-201ENST00000520250 669 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL5A1P20908 AL096840.1-201ENST00000603287 93 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 MIR3976-201ENST00000606807 139 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC126177.8-201ENST00000618339 1015 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AL669831.3-213ENST00000636676 183 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RBBP8P1-201ENST00000449447 1844 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 Y_RNA.251-201ENST00000364551 99 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU4-56P-201ENST00000364700 142 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 SNORD32A-201ENST00000364805 84 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 SNORA22B-201ENST00000383876 138 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU6-95P-201ENST00000384697 107 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU6-331P-201ENST00000384724 107 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC138623.1-201ENST00000418060 216 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A1P20908 MTCO3P29-201ENST00000432119 779 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.19□□□□□ -2.22
COL5A1P20908 MTND5P30-201ENST00000452896 1731 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 MTCO3P10-201ENST00000455912 772 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.19□□□□□ -2.22
COL5A1P20908 AK3P2-201ENST00000507976 429 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AC097473.1-201ENST00000508142 408 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 Y_RNA.708-201ENST00000516950 96 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 RNU6-699P-201ENST00000517081 110 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.19□□□□□ -2.22
COL5A1P20908 7SK.7-201ENST00000603504 247 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 AL355877.2-201ENST00000603670 358 ntBASIC1.19□□□□□ -2.22
COL5A1P20908 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms