Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC022441.3-201ENST00000605737 136 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 TCL6_2.1-201ENST00000615162 119 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 AL365265.1-201ENST00000621045 234 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 AC093010.3-201ENST00000570269 15214 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.42□□□□□ -2.02
TNFRSF1BP20333 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TNFRSF1BP20333 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 MIR549A-201ENST00000385268 96 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RNA5SP21-201ENST00000410917 96 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC097463.2-201ENST00000421074 142 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 UBBP3-201ENST00000445497 241 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC108043.1-201ENST00000512696 574 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RNA5SP112-201ENST00000515937 99 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 RNU6-861P-201ENST00000516745 106 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC087441.2-201ENST00000529141 262 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AP002392.1-201ENST00000537692 208 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 MIR4765-201ENST00000585007 77 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AL162424.1-201ENST00000602325 221 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF1BP20333 SNORD11B-201ENST00000607707 90 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 AC004832.4-201ENST00000608952 331 ntBASIC2.41□□□□□ -2.02
TNFRSF1BP20333 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.4□□□□□ -2.02
TNFRSF1BP20333 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TNFRSF1BP20333 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
TNFRSF1BP20333 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 VTRNA1-1-201ENST00000363120 99 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RNU6-727P-201ENST00000363592 107 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 Y_RNA.383-201ENST00000383855 97 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RNU6-47P-201ENST00000383866 107 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RNU6-1264P-201ENST00000383891 107 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RNU6-1081P-201ENST00000384537 107 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 ELOCP21-201ENST00000412558 336 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 Z98742.2-201ENST00000431564 187 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 Z96811.1-201ENST00000445880 108 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 NDUFB4P10-201ENST00000452541 359 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC103810.1-201ENST00000579873 453 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC011471.1-201ENST00000585766 187 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC007179.3-201ENST00000604976 235 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RPL17P51-201ENST00000605218 238 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC096577.2-201ENST00000611455 153 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 AC110079.1-202ENST00000635213 138 ntBASIC2.4□□□□□ -2.03
TNFRSF1BP20333 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.03
TNFRSF1BP20333 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 UBE2WP1-201ENST00000362030 340 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RNU6-486P-201ENST00000363116 107 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 Y_RNA.199-201ENST00000364014 102 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 SNORD56.5-201ENST00000364281 72 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 Y_RNA.275-201ENST00000364726 110 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RNY4P28-201ENST00000365281 93 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MIR29B2-201ENST00000385055 81 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MIR1289-1-201ENST00000408836 144 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RN7SKP27-201ENST00000410684 333 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RNU6-394P-201ENST00000410735 107 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 RN7SKP51-201ENST00000410781 304 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 EIF4EP4-201ENST00000424916 578 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AC027124.2-201ENST00000428249 105 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MTCO1P5-201ENST00000433573 344 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AC004386.2-201ENST00000441858 148 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AC009237.7-201ENST00000447357 229 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 COX6CP14-201ENST00000469580 174 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AC022559.1-201ENST00000520905 205 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MIR5006-201ENST00000583027 110 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MIR4325-201ENST00000583049 90 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MIR3674-201ENST00000636576 68 ntBASIC2.39□□□□□ -2.03
TNFRSF1BP20333 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
TNFRSF1BP20333 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.38□□□□□ -2.03
TNFRSF1BP20333 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.38□□□□□ -2.03
TNFRSF1BP20333 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFRSF1BP20333 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
TNFRSF1BP20333 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
TNFRSF1BP20333 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms