Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
XRCC1P18887 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
XRCC1P18887 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
XRCC1P18887 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 U8.1-201ENST00000362843 134 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 RNU6-414P-201ENST00000363705 104 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 SNORA72.2-201ENST00000365028 127 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 Y_RNA.338-201ENST00000365320 114 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 SNORA67.2-201ENST00000384300 149 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 MIR32-201ENST00000384965 70 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 AC004866.1-201ENST00000411748 78 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.42□□□□□ -2.18
XRCC1P18887 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 RNU6-58P-201ENST00000517143 103 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.42□□□□□ -2.18
XRCC1P18887 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 MIR5696-201ENST00000578474 85 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 MIR3942-201ENST00000585264 109 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 AL078596.1-201ENST00000624856 447 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 MIR3662-201ENST00000637030 95 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 AC100810.6-201ENST00000638068 285 ntBASIC1.42□□□□□ -2.18
XRCC1P18887 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.42□□□□□ -2.18
XRCC1P18887 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
XRCC1P18887 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
XRCC1P18887 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 Y_RNA.319-201ENST00000365138 92 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
XRCC1P18887 FGF7P8-201ENST00000402994 292 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 RNU2-7P-201ENST00000410794 178 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 RPL23AP36-201ENST00000413895 458 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
XRCC1P18887 AC245047.4-201ENST00000433189 144 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.41□□□□□ -2.18
XRCC1P18887 RNU7-57P-201ENST00000459540 60 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC108729.3-201ENST00000513484 108 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC084364.2-201ENST00000546924 395 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.41□□□□□ -2.18
XRCC1P18887 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.41□□□□□ -2.18
XRCC1P18887 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.41□□□□□ -2.18
XRCC1P18887 MIR4273-201ENST00000582824 84 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 SNORD11B-201ENST00000607707 90 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC093913.1-201ENST00000614178 329 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.41□□□□□ -2.18
XRCC1P18887 MIR338-201ENST00000636369 67 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 AC068205.3-201ENST00000636385 468 ntBASIC1.41□□□□□ -2.18
XRCC1P18887 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
XRCC1P18887 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
XRCC1P18887 snoU2-30.2-201ENST00000362805 70 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNU6-280P-201ENST00000364145 104 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 SNORA63D-201ENST00000364359 132 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 Y_RNA.490-201ENST00000384413 102 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNU6-831P-201ENST00000384548 107 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 MIR549A-201ENST00000385268 96 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 SNORD115-47-201ENST00000391226 86 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
XRCC1P18887 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.4□□□□□ -2.19
XRCC1P18887 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.4□□□□□ -2.19
XRCC1P18887 AC008134.1-201ENST00000420943 193 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 AL139396.1-201ENST00000421137 167 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 MTATP6P13-201ENST00000438531 667 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 HSPE1P9-201ENST00000440046 311 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.4□□□□□ -2.19
XRCC1P18887 AC016717.1-201ENST00000448918 286 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 NDUFB4P10-201ENST00000452541 359 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RPL26P26-201ENST00000480251 434 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNU6-566P-201ENST00000516790 107 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNU1-54P-201ENST00000517181 120 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNA5SP454-201ENST00000517231 127 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 AC126177.8-201ENST00000618339 1015 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 snoZ196.1-201ENST00000625269 89 ntBASIC1.4□□□□□ -2.19
XRCC1P18887 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 RNU6-439P-201ENST00000384188 106 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 RNU6-17P-201ENST00000384245 107 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 RNU6-18P-201ENST00000384527 107 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 RNU6-541P-201ENST00000384709 110 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 MIR1277-201ENST00000408536 78 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 MIR1267-201ENST00000408723 78 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC1P18887 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC1P18887 Z82188.1-201ENST00000436709 154 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 MTND1P17-201ENST00000448961 204 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 RNU7-175P-201ENST00000515915 61 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC1P18887 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
XRCC1P18887 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.39□□□□□ -2.19
XRCC1P18887 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.39□□□□□ -2.19
XRCC1P18887 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
XRCC1P18887 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 MIR487A-201ENST00000385009 80 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms