Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.93□□□□□ -2.26
COL11A1P12107 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.93□□□□□ -2.26
COL11A1P12107 AC006026.2-201ENST00000457376 180 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 MED28P2-201ENST00000475771 317 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AC008628.2-201ENST00000502605 298 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 RPL39P5-202ENST00000512505 151 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 RNU7-30P-201ENST00000516835 62 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 SNORA48.11-201ENST00000517015 89 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AC079598.5-201ENST00000547460 117 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AC233702.2-202ENST00000562547 291 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.93□□□□□ -2.26
COL11A1P12107 MIR8074-201ENST00000615081 81 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 U6atac.1-201ENST00000616025 117 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 AL109933.3-201ENST00000619095 188 ntBASIC0.93□□□□□ -2.26
COL11A1P12107 Y_RNA.85-201ENST00000363014 111 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 Y_RNA.301-201ENST00000364990 103 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-1329P-201ENST00000365664 107 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-26P-201ENST00000383985 107 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-190P-201ENST00000384154 102 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AL133396.1-201ENST00000432048 687 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 JTBP1-201ENST00000441314 247 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 snoU13.30-201ENST00000458951 104 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC007547.1-201ENST00000462177 490 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC018868.1-201ENST00000491307 315 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 TRBVA-201ENST00000498804 316 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.92□□□□□ -2.26
COL11A1P12107 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.92□□□□□ -2.26
COL11A1P12107 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.92□□□□□ -2.26
COL11A1P12107 MRPS36P4-201ENST00000534436 298 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.92□□□□□ -2.26
COL11A1P12107 MIR8076-201ENST00000611401 83 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC005520.5-201ENST00000613926 164 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 SNORD98-201ENST00000636377 67 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL11A1P12107 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL11A1P12107 AC092268.1-201ENST00000342691 405 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 SNORD1A-201ENST00000364968 72 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 SNORD116-11-201ENST00000383882 92 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-546P-201ENST00000383991 107 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-1013P-201ENST00000384180 107 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 Y_RNA.530-201ENST00000384587 101 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MIR29B2-201ENST00000385055 81 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 SNORD115-47-201ENST00000391226 86 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MTND3P9-201ENST00000429526 346 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.92□□□□□ -2.26
COL11A1P12107 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.92□□□□□ -2.26
COL11A1P12107 AC245102.2-201ENST00000448956 180 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AL031274.1-201ENST00000450334 232 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MTND1P11-201ENST00000456661 876 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.92□□□□□ -2.26
COL11A1P12107 AC130509.1-201ENST00000464158 433 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 PTP4A1P4-201ENST00000512479 322 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU4-49P-201ENST00000516080 140 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNA5SP121-201ENST00000516537 101 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-965P-201ENST00000516721 96 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 RNU6-256P-201ENST00000516747 97 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 AC016256.1-201ENST00000547971 354 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.92□□□□□ -2.26
COL11A1P12107 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.92□□□□□ -2.26
COL11A1P12107 CYP4A27P-201ENST00000567218 190 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MIR3923-201ENST00000579521 83 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MIR3688-2-201ENST00000636963 87 ntBASIC0.92□□□□□ -2.26
COL11A1P12107 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.91□□□□□ -2.26
COL11A1P12107 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
COL11A1P12107 Y_RNA.132-201ENST00000363421 102 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 Y_RNA.294-201ENST00000364916 102 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 RNU4-20P-201ENST00000365601 151 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.91□□□□□ -2.26
COL11A1P12107 MIR514A2-201ENST00000385131 88 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 MIR514A3-201ENST00000385132 88 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 MT-TL1-201ENST00000386347 75 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 RNU6-360P-201ENST00000390944 104 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 RNU6-325P-201ENST00000411132 105 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AL117339.3-201ENST00000418733 162 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AL358176.2-201ENST00000425769 204 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 PCMTD1P1-201ENST00000455560 355 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 PRELID3BP1-201ENST00000457142 540 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC010409.1-201ENST00000487382 476 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 RPL23AP75-201ENST00000491601 451 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.91□□□□□ -2.26
COL11A1P12107 RPS23P5-201ENST00000495419 428 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC016632.1-201ENST00000503994 196 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC093259.1-201ENST00000509755 300 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 RNU6-835P-201ENST00000516974 104 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC018638.8-201ENST00000588755 281 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC078795.3-201ENST00000602913 472 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AL121757.2-201ENST00000611223 313 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC007742.2-201ENST00000618226 398 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 AC009248.2-201ENST00000619826 254 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 MIR6835-201ENST00000621552 64 ntBASIC0.91□□□□□ -2.26
COL11A1P12107 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL11A1P12107 RNU6-227P-201ENST00000362865 103 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 RNU6-336P-201ENST00000364891 107 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 Y_RNA.414-201ENST00000384011 101 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 RN7SKP200-201ENST00000410564 320 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.9□□□□□ -2.27
COL11A1P12107 C8orf59P1-201ENST00000429930 303 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms