Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.69□□□□□ -2.14
VIMP08670 AC091179.3-201ENST00000474761 144 ntBASIC1.69□□□□□ -2.14
VIMP08670 SNORA44.1-201ENST00000517031 108 ntBASIC1.69□□□□□ -2.14
VIMP08670 AL355802.3-201ENST00000607571 545 ntBASIC1.69□□□□□ -2.14
VIMP08670 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.69□□□□□ -2.14
VIMP08670 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
VIMP08670 CASC19-280ENST00000642102 1351 ntBASIC1.69□□□□□ -2.14
VIMP08670 SNORA33-201ENST00000363664 130 ntBASIC1.68□□□□□ -2.14
VIMP08670 RNU6-280P-201ENST00000364145 104 ntBASIC1.68□□□□□ -2.14
VIMP08670 Y_RNA.248-201ENST00000364501 109 ntBASIC1.68□□□□□ -2.14
VIMP08670 Y_RNA.415-201ENST00000384012 112 ntBASIC1.68□□□□□ -2.14
VIMP08670 MIR10B-201ENST00000385011 110 ntBASIC1.68□□□□□ -2.14
VIMP08670 MIR548B-201ENST00000385247 97 ntBASIC1.68□□□□□ -2.14
VIMP08670 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
VIMP08670 USMG5P1-201ENST00000425964 177 ntBASIC1.68□□□□□ -2.14
VIMP08670 MTND3P23-201ENST00000431980 347 ntBASIC1.68□□□□□ -2.14
VIMP08670 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
VIMP08670 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.68□□□□□ -2.14
VIMP08670 AC107399.1-201ENST00000451226 265 ntBASIC1.68□□□□□ -2.14
VIMP08670 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
VIMP08670 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.68□□□□□ -2.14
VIMP08670 Y_RNA.670-201ENST00000516255 105 ntBASIC1.68□□□□□ -2.14
VIMP08670 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.68□□□□□ -2.14
VIMP08670 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
VIMP08670 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.68□□□□□ -2.14
VIMP08670 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
VIMP08670 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.68□□□□□ -2.14
VIMP08670 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
VIMP08670 Y_RNA.2-201ENST00000362330 96 ntBASIC1.67□□□□□ -2.14
VIMP08670 U8.2-201ENST00000363156 134 ntBASIC1.67□□□□□ -2.14
VIMP08670 Y_RNA.339-201ENST00000365325 102 ntBASIC1.67□□□□□ -2.14
VIMP08670 Y_RNA.500-201ENST00000384466 111 ntBASIC1.67□□□□□ -2.14
VIMP08670 RNU6-417P-201ENST00000384712 107 ntBASIC1.67□□□□□ -2.14
VIMP08670 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VIMP08670 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VIMP08670 RNU6-1050P-201ENST00000410388 107 ntBASIC1.67□□□□□ -2.14
VIMP08670 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
VIMP08670 RNU6-221P-201ENST00000459541 99 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC082651.2-201ENST00000496833 166 ntBASIC1.67□□□□□ -2.14
VIMP08670 HMGN1P13-201ENST00000505795 138 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC025465.3-201ENST00000510570 311 ntBASIC1.67□□□□□ -2.14
VIMP08670 RNU6-1146P-201ENST00000516282 102 ntBASIC1.67□□□□□ -2.14
VIMP08670 RNU7-30P-201ENST00000516835 62 ntBASIC1.67□□□□□ -2.14
VIMP08670 Y_RNA.706-201ENST00000516933 99 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC025647.1-201ENST00000517879 253 ntBASIC1.67□□□□□ -2.14
VIMP08670 AK6P2-201ENST00000549020 471 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.67□□□□□ -2.14
VIMP08670 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
VIMP08670 MIR5695-201ENST00000579717 85 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC016925.2-201ENST00000605108 242 ntBASIC1.67□□□□□ -2.14
VIMP08670 AC100812.1-201ENST00000607622 580 ntBASIC1.67□□□□□ -2.14
VIMP08670 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
VIMP08670 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
VIMP08670 RNU6-222P-201ENST00000362438 107 ntBASIC1.66□□□□□ -2.14
VIMP08670 Y_RNA.160-201ENST00000363677 92 ntBASIC1.66□□□□□ -2.14
VIMP08670 Y_RNA.179-201ENST00000363844 90 ntBASIC1.66□□□□□ -2.14
VIMP08670 SNORA63D-201ENST00000364359 132 ntBASIC1.66□□□□□ -2.14
VIMP08670 RNU6-593P-201ENST00000364716 112 ntBASIC1.66□□□□□ -2.14
VIMP08670 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
VIMP08670 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VIMP08670 RNU6-767P-201ENST00000384132 107 ntBASIC1.66□□□□□ -2.14
VIMP08670 RNU6-793P-201ENST00000384233 104 ntBASIC1.66□□□□□ -2.14
VIMP08670 RNU6-601P-201ENST00000384540 107 ntBASIC1.66□□□□□ -2.14
VIMP08670 MIR583-201ENST00000384846 75 ntBASIC1.66□□□□□ -2.14
VIMP08670 MIR1253-201ENST00000408273 105 ntBASIC1.66□□□□□ -2.14
VIMP08670 RNU6-955P-201ENST00000410497 104 ntBASIC1.66□□□□□ -2.14
VIMP08670 RPL37P10-201ENST00000412884 288 ntBASIC1.66□□□□□ -2.14
VIMP08670 EBAG9P1-201ENST00000418955 543 ntBASIC1.66□□□□□ -2.14
VIMP08670 AC112492.4-201ENST00000456549 352 ntBASIC1.66□□□□□ -2.14
VIMP08670 AC008549.1-201ENST00000512900 643 ntBASIC1.66□□□□□ -2.14
VIMP08670 AC046134.1-201ENST00000514454 666 ntBASIC1.66□□□□□ -2.14
VIMP08670 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.66□□□□□ -2.14
VIMP08670 MZT1P2-201ENST00000604387 248 ntBASIC1.66□□□□□ -2.14
VIMP08670 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.66□□□□□ -2.14
VIMP08670 AC005014.2-201ENST00000607795 599 ntBASIC1.66□□□□□ -2.14
VIMP08670 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.66□□□□□ -2.14
VIMP08670 Y_RNA.88-201ENST00000363029 99 ntBASIC1.65□□□□□ -2.15
VIMP08670 Y_RNA.106-201ENST00000363189 100 ntBASIC1.65□□□□□ -2.15
VIMP08670 RNU6-414P-201ENST00000363705 104 ntBASIC1.65□□□□□ -2.15
VIMP08670 RNU5F-3P-201ENST00000363767 117 ntBASIC1.65□□□□□ -2.15
VIMP08670 Y_RNA.184-201ENST00000363884 108 ntBASIC1.65□□□□□ -2.15
VIMP08670 SNORA3.2-201ENST00000408221 125 ntBASIC1.65□□□□□ -2.15
VIMP08670 MTND1P2-201ENST00000430604 821 ntBASIC1.65□□□□□ -2.15
VIMP08670 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.65□□□□□ -2.15
VIMP08670 RPL36AP21-201ENST00000490372 323 ntBASIC1.65□□□□□ -2.15
VIMP08670 Y_RNA.708-201ENST00000516950 96 ntBASIC1.65□□□□□ -2.15
VIMP08670 AC005668.1-201ENST00000571142 476 ntBASIC1.65□□□□□ -2.15
VIMP08670 AC009229.3-201ENST00000608056 282 ntBASIC1.65□□□□□ -2.15
VIMP08670 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
VIMP08670 MIR449A-201ENST00000362113 91 ntBASIC1.64□□□□□ -2.15
VIMP08670 Y_RNA.111-201ENST00000363248 100 ntBASIC1.64□□□□□ -2.15
VIMP08670 U3.8-201ENST00000363675 217 ntBASIC1.64□□□□□ -2.15
VIMP08670 RNU6-1240P-201ENST00000365155 104 ntBASIC1.64□□□□□ -2.15
VIMP08670 RNU6-360P-201ENST00000390944 104 ntBASIC1.64□□□□□ -2.15
VIMP08670 RNA5SP467-201ENST00000391274 118 ntBASIC1.64□□□□□ -2.15
VIMP08670 RNU6-876P-201ENST00000391295 104 ntBASIC1.64□□□□□ -2.15
VIMP08670 MIR1185-2-201ENST00000408687 86 ntBASIC1.64□□□□□ -2.15
VIMP08670 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.64□□□□□ -2.15
VIMP08670 AC008134.1-201ENST00000420943 193 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms