Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MTND1P5-201ENST00000517906 940 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.93□□□□□ -2.26
MT-ND4P03905 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.93□□□□□ -2.26
MT-ND4P03905 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.93□□□□□ -2.26
MT-ND4P03905 AL512310.8-201ENST00000550183 120 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.93□□□□□ -2.26
MT-ND4P03905 AC010620.1-201ENST00000601088 1102 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AL929325.1-201ENST00000603096 117 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC004492.1-201ENST00000607036 742 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 Z99129.1-201ENST00000612510 255 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 AC124864.2-201ENST00000624736 186 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 snoZ196.1-201ENST00000625269 89 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 U6.108-201ENST00000637764 58 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 OR4G1P-203ENST00000641984 1631 ntBASIC0.93□□□□□ -2.26
MT-ND4P03905 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
MT-ND4P03905 Y_RNA.151-201ENST00000363566 112 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 RNA5SP259-201ENST00000365541 109 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 RNU6-1042P-201ENST00000384204 107 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 RNA5SP323-201ENST00000391094 133 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AL590002.1-201ENST00000406554 418 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AL356776.1-201ENST00000406574 447 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 MIR320B2-201ENST00000408479 138 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AC010154.1-201ENST00000425857 269 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.92□□□□□ -2.26
MT-ND4P03905 ERLEC1P1-201ENST00000433806 578 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 Z82188.1-201ENST00000436709 154 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
MT-ND4P03905 AC024995.1-201ENST00000523014 93 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 MZT1P2-201ENST00000604387 248 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AC021506.2-201ENST00000612354 169 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AL157834.3-201ENST00000615543 103 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 AL359880.1-201ENST00000621879 266 ntBASIC0.92□□□□□ -2.26
MT-ND4P03905 RNA5SP99-201ENST00000364020 114 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 RNU6-780P-201ENST00000391030 104 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AC005002.2-201ENST00000438228 269 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.91□□□□□ -2.26
MT-ND4P03905 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 Y_RNA.665-201ENST00000516177 98 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 SNORA31.10-201ENST00000516482 106 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 AL512360.1-201ENST00000555346 234 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.91□□□□□ -2.26
MT-ND4P03905 AC010525.2-201ENST00000590920 195 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 AC068137.3-201ENST00000639191 341 ntBASIC0.91□□□□□ -2.26
MT-ND4P03905 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
MT-ND4P03905 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MT-ND4P03905 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
MT-ND4P03905 MIR378A-201ENST00000362177 66 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 RNU6-1252P-201ENST00000363054 104 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 RNU6-1240P-201ENST00000365155 104 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 Y_RNA.373-201ENST00000365600 103 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 RNU6-790P-201ENST00000384479 105 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 MIR32-201ENST00000384965 70 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 Y_RNA.615-201ENST00000410769 117 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AC008134.1-201ENST00000420943 193 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AL590632.1-201ENST00000424289 371 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 Z82205.1-201ENST00000428456 297 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AL353572.1-201ENST00000442490 417 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AC103851.1-201ENST00000506833 274 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 RNA5SP54-201ENST00000516951 92 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 SUMO2P16-201ENST00000519475 264 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.9□□□□□ -2.27
MT-ND4P03905 MIR3664-201ENST00000579074 99 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AC022217.4-201ENST00000604389 163 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 SNORD11B-201ENST00000607707 90 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 AC005858.4-201ENST00000623191 700 ntBASIC0.9□□□□□ -2.27
MT-ND4P03905 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.9□□□□□ -2.27
MT-ND4P03905 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU6-1123P-201ENST00000362347 106 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 SNORD115-8-201ENST00000363856 82 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 SNORD87-201ENST00000364849 89 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 SNORD115-38-201ENST00000365037 82 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU6-128P-201ENST00000383976 107 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU6-95P-201ENST00000384697 107 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU6-1031P-201ENST00000384773 107 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
MT-ND4P03905 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
MT-ND4P03905 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.89□□□□□ -2.27
MT-ND4P03905 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.89□□□□□ -2.27
MT-ND4P03905 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.89□□□□□ -2.27
MT-ND4P03905 AL445305.1-201ENST00000432577 575 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 NDUFA5P4-201ENST00000436704 385 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 SEPT14P3-201ENST00000439401 183 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 AL732372.2-207ENST00000445840 183 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.89□□□□□ -2.27
MT-ND4P03905 SEPT14P2-201ENST00000453405 183 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 MTND1P11-201ENST00000456661 876 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms