Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.463-201ENST00000384271 102 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 Y_RNA.535-201ENST00000384612 99 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR597-201ENST00000384968 97 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU6-700P-201ENST00000391043 107 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AL357139.1-201ENST00000407792 426 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU6-1156P-201ENST00000410365 100 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNA5SP508-201ENST00000411327 119 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MTCYBP10-201ENST00000424905 650 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC092423.1-201ENST00000430165 186 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC236972.2-201ENST00000434979 310 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU7-14P-201ENST00000459331 62 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNA5SP57-201ENST00000459463 123 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC027575.1-201ENST00000481064 460 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC132942.1-201ENST00000486753 483 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 RNU6-307P-201ENST00000516743 106 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 Y_RNA.706-201ENST00000516933 99 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC004584.2-201ENST00000570407 410 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR4435-1-201ENST00000582552 80 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR5006-201ENST00000583027 110 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 7SK.7-201ENST00000603504 247 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC025754.2-201ENST00000606491 432 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 TCL6_2.1-201ENST00000615162 119 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.73□□□□□ -2.13
MT-ND1P03886 MTND5P16-201ENST00000460269 1703 ntBASIC1.73□□□□□ -2.13
MT-ND1P03886 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
MT-ND1P03886 MIR340-201ENST00000362125 95 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 Y_RNA.5-201ENST00000362334 102 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 RNU6-1115P-201ENST00000362490 106 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 Y_RNA.146-201ENST00000363549 102 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 RNU6-873P-201ENST00000363833 107 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 Y_RNA.358-201ENST00000365491 99 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 Y_RNA.496-201ENST00000384444 101 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 Y_RNA.557-201ENST00000384680 107 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND1P03886 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 CHEK2P4-201ENST00000450340 246 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND1P03886 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND1P03886 RPS23P5-201ENST00000495419 428 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND1P03886 RNU5F-4P-201ENST00000516581 114 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 RNA5SP54-201ENST00000516951 92 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 AC024614.2-201ENST00000577584 372 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 AC080078.3-201ENST00000605407 463 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
MT-ND1P03886 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.72□□□□□ -2.13
MT-ND1P03886 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
MT-ND1P03886 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND1P03886 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.13
MT-ND1P03886 MTND5P10-201ENST00000603719 1809 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-490P-201ENST00000362985 107 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-137P-201ENST00000363680 108 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 Y_RNA.364-201ENST00000365532 101 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-281P-201ENST00000384212 103 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 SNORA67.2-201ENST00000384300 149 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-160P-201ENST00000384591 107 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-541P-201ENST00000384709 110 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 Y_RNA.577-201ENST00000384794 101 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNA5SP504-201ENST00000410676 117 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNA5SP501-201ENST00000410990 112 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RN7SKP192-201ENST00000411291 327 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 EIF1P2-201ENST00000428233 350 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU7-87P-201ENST00000459343 62 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.71□□□□□ -2.14
MT-ND1P03886 SNORA25.14-201ENST00000516481 132 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNU6-264P-201ENST00000517134 104 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 RNA5SP490-201ENST00000517141 136 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.71□□□□□ -2.14
MT-ND1P03886 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.71□□□□□ -2.14
MT-ND1P03886 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 AC125232.2-201ENST00000592457 143 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.71□□□□□ -2.14
MT-ND1P03886 AC130454.1-201ENST00000622948 401 ntBASIC1.71□□□□□ -2.14
MT-ND1P03886 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.71□□□□□ -2.14
MT-ND1P03886 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MT-ND1P03886 SNORD114-6-201ENST00000364393 72 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 Y_RNA.332-201ENST00000365271 113 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 SNORD42.2-201ENST00000365570 69 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 RNU1-139P-201ENST00000391307 165 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
MT-ND1P03886 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.7□□□□□ -2.14
MT-ND1P03886 AC009237.7-201ENST00000447357 229 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.7□□□□□ -2.14
MT-ND1P03886 HMGB3P17-201ENST00000504195 649 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.7□□□□□ -2.14
MT-ND1P03886 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AK6P2-201ENST00000549020 471 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AC026470.2-201ENST00000561492 181 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 MIR5695-201ENST00000579717 85 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 SNRPGP20-201ENST00000604477 205 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AL080274.1-201ENST00000605565 220 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AC133104.2-201ENST00000615272 193 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms