Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.29□□□□□ -2.36
APOEP02649 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.29□□□□□ -2.36
APOEP02649 DAP3P1-201ENST00000441522 278 ntBASIC0.29□□□□□ -2.36
APOEP02649 RNU7-182P-201ENST00000459009 62 ntBASIC0.29□□□□□ -2.36
APOEP02649 RNU6-221P-201ENST00000459541 99 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC022493.2-201ENST00000506122 481 ntBASIC0.29□□□□□ -2.36
APOEP02649 SNORA70.12-201ENST00000516084 153 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC023827.1-201ENST00000569247 97 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC011712.1-201ENST00000588959 234 ntBASIC0.29□□□□□ -2.36
APOEP02649 RNU6-85P-201ENST00000605989 107 ntBASIC0.29□□□□□ -2.36
APOEP02649 AL391903.3-201ENST00000612158 163 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC093913.1-201ENST00000614178 329 ntBASIC0.29□□□□□ -2.36
APOEP02649 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.29□□□□□ -2.36
APOEP02649 AL078596.1-201ENST00000624856 447 ntBASIC0.29□□□□□ -2.36
APOEP02649 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
APOEP02649 SEPT14P19-203ENST00000633205 211 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC010487.4-201ENST00000637027 61 ntBASIC0.29□□□□□ -2.36
APOEP02649 AC007671.2-201ENST00000637344 619 ntBASIC0.29□□□□□ -2.36
APOEP02649 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
APOEP02649 RNU5B-2P-201ENST00000363036 113 ntBASIC0.28□□□□□ -2.36
APOEP02649 RNU5F-7P-201ENST00000363696 115 ntBASIC0.28□□□□□ -2.36
APOEP02649 Y_RNA.330-201ENST00000365230 109 ntBASIC0.28□□□□□ -2.36
APOEP02649 RNY1P4-201ENST00000384595 115 ntBASIC0.28□□□□□ -2.36
APOEP02649 U8.16-201ENST00000391279 133 ntBASIC0.28□□□□□ -2.36
APOEP02649 RNA5SP511-201ENST00000410487 115 ntBASIC0.28□□□□□ -2.36
APOEP02649 RNA5SP494-201ENST00000410653 129 ntBASIC0.28□□□□□ -2.36
APOEP02649 AL008987.1-201ENST00000415528 237 ntBASIC0.28□□□□□ -2.36
APOEP02649 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.28□□□□□ -2.36
APOEP02649 AC104332.1-201ENST00000440471 797 ntBASIC0.28□□□□□ -2.36
APOEP02649 AC022364.2-201ENST00000457963 554 ntBASIC0.28□□□□□ -2.36
APOEP02649 U7.7-201ENST00000459276 60 ntBASIC0.28□□□□□ -2.36
APOEP02649 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.28□□□□□ -2.36
APOEP02649 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.28□□□□□ -2.36
APOEP02649 AC010493.1-201ENST00000513479 292 ntBASIC0.28□□□□□ -2.36
APOEP02649 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.28□□□□□ -2.36
APOEP02649 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
APOEP02649 SNORD27.1-201ENST00000516319 72 ntBASIC0.28□□□□□ -2.36
APOEP02649 MTND4P33-201ENST00000556706 766 ntBASIC0.28□□□□□ -2.36
APOEP02649 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
APOEP02649 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
APOEP02649 AC234772.3-201ENST00000602277 528 ntBASIC0.28□□□□□ -2.36
APOEP02649 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.28□□□□□ -2.36
APOEP02649 AC004832.4-201ENST00000608952 331 ntBASIC0.28□□□□□ -2.36
APOEP02649 RNU6-424P-201ENST00000384367 105 ntBASIC0.27□□□□□ -2.37
APOEP02649 MIR1-2-201ENST00000384961 85 ntBASIC0.27□□□□□ -2.37
APOEP02649 RPS26P42-201ENST00000413485 326 ntBASIC0.27□□□□□ -2.37
APOEP02649 AC106883.1-201ENST00000418805 562 ntBASIC0.27□□□□□ -2.37
APOEP02649 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.27□□□□□ -2.37
APOEP02649 AL162725.1-201ENST00000435405 301 ntBASIC0.27□□□□□ -2.37
APOEP02649 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.27□□□□□ -2.37
APOEP02649 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
APOEP02649 LINC01399-202ENST00000458450 244 ntBASIC0.27□□□□□ -2.37
APOEP02649 SCARNA18-201ENST00000459004 134 ntBASIC0.27□□□□□ -2.37
APOEP02649 RNU7-99P-201ENST00000516271 62 ntBASIC0.27□□□□□ -2.37
APOEP02649 AC016256.1-201ENST00000547971 354 ntBASIC0.27□□□□□ -2.37
APOEP02649 AC025627.3-201ENST00000582078 182 ntBASIC0.27□□□□□ -2.37
APOEP02649 AC131055.1-201ENST00000584626 316 ntBASIC0.27□□□□□ -2.37
APOEP02649 U6.73-201ENST00000619194 103 ntBASIC0.27□□□□□ -2.37
APOEP02649 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
APOEP02649 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
APOEP02649 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
APOEP02649 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.26□□□□□ -2.37
APOEP02649 AC244098.3-201ENST00000424803 96 ntBASIC0.26□□□□□ -2.37
APOEP02649 RPL23AP50-201ENST00000434149 455 ntBASIC0.26□□□□□ -2.37
APOEP02649 GPR143P-201ENST00000434155 205 ntBASIC0.26□□□□□ -2.37
APOEP02649 MTND4LP16-201ENST00000440828 295 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC079781.2-201ENST00000446424 169 ntBASIC0.26□□□□□ -2.37
APOEP02649 AL009048.1-201ENST00000450437 298 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC092989.1-201ENST00000481235 277 ntBASIC0.26□□□□□ -2.37
APOEP02649 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
APOEP02649 RNU6-612P-201ENST00000516909 102 ntBASIC0.26□□□□□ -2.37
APOEP02649 RNU1-117P-201ENST00000517041 158 ntBASIC0.26□□□□□ -2.37
APOEP02649 RNA5SP454-201ENST00000517231 127 ntBASIC0.26□□□□□ -2.37
APOEP02649 MTCO3P23-201ENST00000561363 289 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.26□□□□□ -2.37
APOEP02649 MIR4703-201ENST00000577728 79 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC011195.1-201ENST00000578177 177 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC068790.2-201ENST00000602601 557 ntBASIC0.26□□□□□ -2.37
APOEP02649 AC100810.6-201ENST00000638068 285 ntBASIC0.26□□□□□ -2.37
APOEP02649 SNORA36.2-201ENST00000384004 127 ntBASIC0.25□□□□□ -2.37
APOEP02649 SNORD73A-201ENST00000386062 65 ntBASIC0.25□□□□□ -2.37
APOEP02649 RNA5SP222-201ENST00000411039 105 ntBASIC0.25□□□□□ -2.37
APOEP02649 RNU6-195P-201ENST00000411352 109 ntBASIC0.25□□□□□ -2.37
APOEP02649 MTCO2P3-201ENST00000442543 421 ntBASIC0.25□□□□□ -2.37
APOEP02649 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.25□□□□□ -2.37
APOEP02649 RPS29P27-201ENST00000463711 170 ntBASIC0.25□□□□□ -2.37
APOEP02649 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.25□□□□□ -2.37
APOEP02649 AC069113.1-201ENST00000517763 267 ntBASIC0.25□□□□□ -2.37
APOEP02649 AC109810.1-201ENST00000534066 224 ntBASIC0.25□□□□□ -2.37
APOEP02649 MIR3192-201ENST00000584920 77 ntBASIC0.25□□□□□ -2.37
APOEP02649 BNIP3P39-201ENST00000601077 554 ntBASIC0.25□□□□□ -2.37
APOEP02649 AC139792.3-201ENST00000623525 224 ntBASIC0.25□□□□□ -2.37
APOEP02649 AC008873.1-201ENST00000625051 138 ntBASIC0.25□□□□□ -2.37
APOEP02649 RNU6-500P-201ENST00000362349 107 ntBASIC0.24□□□□□ -2.37
APOEP02649 RNY4P34-201ENST00000364779 95 ntBASIC0.24□□□□□ -2.37
APOEP02649 USP9YP29-201ENST00000445112 563 ntBASIC0.24□□□□□ -2.37
APOEP02649 AC007215.1-201ENST00000464893 276 ntBASIC0.24□□□□□ -2.37
APOEP02649 OR9P1P-201ENST00000496431 281 ntBASIC0.24□□□□□ -2.37
APOEP02649 AC079140.5-201ENST00000507882 310 ntBASIC0.24□□□□□ -2.37
APOEP02649 RN7SKP12-201ENST00000516275 143 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms