Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RMST_4.1-201ENST00000616886 107 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 U6.99-201ENST00000637524 83 ntBASIC2.15□□□□□ -2.06
COL2A1P02458 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.15□□□□□ -2.06
COL2A1P02458 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL2A1P02458 Y_RNA.76-201ENST00000362931 109 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 SNORD113-8-201ENST00000363497 74 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU6-173P-201ENST00000364215 104 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL2A1P02458 RNU4-30P-201ENST00000410245 143 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC244098.2-201ENST00000422068 99 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.14□□□□□ -2.07
COL2A1P02458 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL2A1P02458 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.14□□□□□ -2.07
COL2A1P02458 AC087588.1-201ENST00000462203 316 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC073901.1-201ENST00000462471 408 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC067942.3-201ENST00000512025 362 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 SERF1AP1-201ENST00000514575 187 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU6-255P-201ENST00000516957 105 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 MIR4659A-201ENST00000580269 81 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC240442.1-201ENST00000616055 283 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RMST_2.1-201ENST00000617263 136 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL2A1P02458 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL2A1P02458 MIR412-201ENST00000362142 91 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 Y_RNA.27-201ENST00000362540 103 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 Y_RNA.29-201ENST00000362570 113 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 VTRNA1-1-201ENST00000363120 99 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 Y_RNA.286-201ENST00000364813 102 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU6-336P-201ENST00000364891 107 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 Y_RNA.478-201ENST00000384358 107 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU6-166P-201ENST00000384371 107 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU1-57P-201ENST00000384491 166 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 MIR607-201ENST00000385241 96 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 MIR1298-201ENST00000408783 112 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.14□□□□□ -2.07
COL2A1P02458 AL117339.3-201ENST00000418733 162 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 SSXP4-201ENST00000451349 245 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU7-95P-201ENST00000459222 64 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU7-175P-201ENST00000515915 61 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 IGLV3-17-201ENST00000519099 244 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AP004371.1-201ENST00000525240 214 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC024405.2-202ENST00000532731 184 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AL442163.3-201ENST00000554110 156 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC010928.2-201ENST00000588017 287 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC008962.1-201ENST00000605729 304 ntBASIC2.14□□□□□ -2.07
COL2A1P02458 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.14□□□□□ -2.07
COL2A1P02458 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.14□□□□□ -2.07
COL2A1P02458 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.14□□□□□ -2.07
COL2A1P02458 AL136164.4-201ENST00000625013 2135 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AC009541.1-201ENST00000438279 2662 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.13□□□□□ -2.07
COL2A1P02458 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.13□□□□□ -2.07
COL2A1P02458 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.13□□□□□ -2.07
COL2A1P02458 RNU6-858P-201ENST00000362436 107 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNU6-600P-201ENST00000362524 99 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 Y_RNA.200-201ENST00000364018 102 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNU6-879P-201ENST00000364328 108 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 U3.13-201ENST00000364804 214 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNU6-886P-201ENST00000384319 105 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 MIR32-201ENST00000384965 70 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNU1-101P-201ENST00000391171 127 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 MIR548H3-201ENST00000408771 118 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNU2-68P-201ENST00000410878 191 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 Y_RNA.793-201ENST00000411222 111 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 Z85995.1-201ENST00000415547 335 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 COX6CP10-201ENST00000416832 224 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RPL27AP8-201ENST00000424277 446 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AL627311.1-201ENST00000431514 115 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AL591043.1-201ENST00000432461 424 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 FABP5P15-201ENST00000453566 214 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RPL30P1-201ENST00000488676 339 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AC091874.1-201ENST00000511402 339 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.13□□□□□ -2.07
COL2A1P02458 RNU6-346P-201ENST00000516288 111 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 RNY3P16-201ENST00000516338 101 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 Y_RNA.706-201ENST00000516933 99 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 CASP1P1-201ENST00000526345 212 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.13□□□□□ -2.07
COL2A1P02458 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.13□□□□□ -2.07
COL2A1P02458 FTX_2.1-201ENST00000618816 94 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.13□□□□□ -2.07
COL2A1P02458 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL2A1P02458 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
COL2A1P02458 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL2A1P02458 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.12□□□□□ -2.07
COL2A1P02458 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
COL2A1P02458 Y_RNA.8-201ENST00000362353 102 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 Y_RNA.83-201ENST00000363005 113 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 RNU5E-7P-201ENST00000365290 117 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 RNU6-47P-201ENST00000383866 107 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 MIR549A-201ENST00000385268 96 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.12□□□□□ -2.07
COL2A1P02458 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms