Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
MBD3O95983 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.33□□□□□ -2.2
MBD3O95983 AC095038.3-201ENST00000634439 195 ntBASIC1.33□□□□□ -2.2
MBD3O95983 ZNF204P-201ENST00000416749 2397 ntBASIC1.32□□□□□ -2.2
MBD3O95983 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MBD3O95983 RNU5F-3P-201ENST00000363767 117 ntBASIC1.32□□□□□ -2.2
MBD3O95983 Y_RNA.373-201ENST00000365600 103 ntBASIC1.32□□□□□ -2.2
MBD3O95983 RNU6-950P-201ENST00000384651 107 ntBASIC1.32□□□□□ -2.2
MBD3O95983 RNU6-95P-201ENST00000384697 107 ntBASIC1.32□□□□□ -2.2
MBD3O95983 MIR549A-201ENST00000385268 96 ntBASIC1.32□□□□□ -2.2
MBD3O95983 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.32□□□□□ -2.2
MBD3O95983 AC073910.1-201ENST00000445047 438 ntBASIC1.32□□□□□ -2.2
MBD3O95983 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.32□□□□□ -2.2
MBD3O95983 RNU7-66P-201ENST00000459469 62 ntBASIC1.32□□□□□ -2.2
MBD3O95983 AC025647.1-201ENST00000517879 253 ntBASIC1.32□□□□□ -2.2
MBD3O95983 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
MBD3O95983 ZNF519P2-201ENST00000557032 169 ntBASIC1.32□□□□□ -2.2
MBD3O95983 AC023043.2-201ENST00000589678 1026 ntBASIC1.32□□□□□ -2.2
MBD3O95983 SNORD11B-201ENST00000607707 90 ntBASIC1.32□□□□□ -2.2
MBD3O95983 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.32□□□□□ -2.2
MBD3O95983 Y_RNA.287-201ENST00000364853 94 ntBASIC1.31□□□□□ -2.2
MBD3O95983 RNU6-790P-201ENST00000384479 105 ntBASIC1.31□□□□□ -2.2
MBD3O95983 Y_RNA.559-201ENST00000384686 107 ntBASIC1.31□□□□□ -2.2
MBD3O95983 MIR181A1-201ENST00000385026 110 ntBASIC1.31□□□□□ -2.2
MBD3O95983 Y_RNA.615-201ENST00000410769 117 ntBASIC1.31□□□□□ -2.2
MBD3O95983 RNU6-373P-201ENST00000411247 98 ntBASIC1.31□□□□□ -2.2
MBD3O95983 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
MBD3O95983 COX6CP10-201ENST00000416832 224 ntBASIC1.31□□□□□ -2.2
MBD3O95983 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.31□□□□□ -2.2
MBD3O95983 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.31□□□□□ -2.2
MBD3O95983 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.31□□□□□ -2.2
MBD3O95983 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.31□□□□□ -2.2
MBD3O95983 RNU6-506P-201ENST00000516553 94 ntBASIC1.31□□□□□ -2.2
MBD3O95983 RNU6-256P-201ENST00000516747 97 ntBASIC1.31□□□□□ -2.2
MBD3O95983 RNU6-58P-201ENST00000517143 103 ntBASIC1.31□□□□□ -2.2
MBD3O95983 POLR3GP2-201ENST00000588366 668 ntBASIC1.31□□□□□ -2.2
MBD3O95983 AC073413.2-201ENST00000604332 360 ntBASIC1.31□□□□□ -2.2
MBD3O95983 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MBD3O95983 Y_RNA.151-201ENST00000363566 112 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RNU4-24P-201ENST00000364565 139 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RNU6-1240P-201ENST00000365155 104 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RNU6-596P-201ENST00000365395 98 ntBASIC1.3□□□□□ -2.2
MBD3O95983 MIR153-2-201ENST00000385225 87 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RNU6-780P-201ENST00000391030 104 ntBASIC1.3□□□□□ -2.2
MBD3O95983 MIR1253-201ENST00000408273 105 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
MBD3O95983 MTCO3P18-201ENST00000440206 761 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
MBD3O95983 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.3□□□□□ -2.2
MBD3O95983 Y_RNA.704-201ENST00000516851 102 ntBASIC1.3□□□□□ -2.2
MBD3O95983 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
MBD3O95983 AC019176.1-201ENST00000518519 225 ntBASIC1.3□□□□□ -2.2
MBD3O95983 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.3□□□□□ -2.2
MBD3O95983 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
MBD3O95983 MIR5696-201ENST00000578474 85 ntBASIC1.3□□□□□ -2.2
MBD3O95983 MIR4742-201ENST00000581069 85 ntBASIC1.3□□□□□ -2.2
MBD3O95983 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.3□□□□□ -2.2
MBD3O95983 AC006504.8-201ENST00000621046 635 ntBASIC1.3□□□□□ -2.2
MBD3O95983 AC099654.12-201ENST00000639868 649 ntBASIC1.3□□□□□ -2.2
MBD3O95983 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
MBD3O95983 U3.8-201ENST00000363675 217 ntBASIC1.29□□□□□ -2.2
MBD3O95983 MIR513A1-201ENST00000385138 129 ntBASIC1.29□□□□□ -2.2
MBD3O95983 AL590002.1-201ENST00000406554 418 ntBASIC1.29□□□□□ -2.2
MBD3O95983 RNA5SP504-201ENST00000410676 117 ntBASIC1.29□□□□□ -2.2
MBD3O95983 RNU6-57P-201ENST00000411348 103 ntBASIC1.29□□□□□ -2.2
MBD3O95983 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.29□□□□□ -2.2
MBD3O95983 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD3O95983 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD3O95983 RPS26P45-201ENST00000471748 340 ntBASIC1.29□□□□□ -2.2
MBD3O95983 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD3O95983 ACA59.1-201ENST00000515966 143 ntBASIC1.29□□□□□ -2.2
MBD3O95983 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD3O95983 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.29□□□□□ -2.2
MBD3O95983 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
MBD3O95983 RNU6-1123P-201ENST00000362347 106 ntBASIC1.28□□□□□ -2.2
MBD3O95983 RNU1-17P-201ENST00000363022 152 ntBASIC1.28□□□□□ -2.2
MBD3O95983 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
MBD3O95983 RNU6-280P-201ENST00000364145 104 ntBASIC1.28□□□□□ -2.2
MBD3O95983 Y_RNA.414-201ENST00000384011 101 ntBASIC1.28□□□□□ -2.2
MBD3O95983 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
MBD3O95983 RNU6-417P-201ENST00000384712 107 ntBASIC1.28□□□□□ -2.2
MBD3O95983 MIR32-201ENST00000384965 70 ntBASIC1.28□□□□□ -2.2
MBD3O95983 MIR764-201ENST00000390811 85 ntBASIC1.28□□□□□ -2.2
MBD3O95983 AC016909.1-201ENST00000415916 166 ntBASIC1.28□□□□□ -2.2
MBD3O95983 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
MBD3O95983 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.28□□□□□ -2.2
MBD3O95983 HMGN1P12-201ENST00000499125 195 ntBASIC1.28□□□□□ -2.2
MBD3O95983 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
MBD3O95983 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.28□□□□□ -2.2
MBD3O95983 MIR3672-201ENST00000584290 82 ntBASIC1.28□□□□□ -2.2
MBD3O95983 AC124303.1-201ENST00000605703 360 ntBASIC1.28□□□□□ -2.2
MBD3O95983 AC006001.4-201ENST00000622243 395 ntBASIC1.28□□□□□ -2.2
MBD3O95983 Y_RNA.38-201ENST00000362617 102 ntBASIC1.27□□□□□ -2.21
MBD3O95983 RNA5SP99-201ENST00000364020 114 ntBASIC1.27□□□□□ -2.21
MBD3O95983 Y_RNA.319-201ENST00000365138 92 ntBASIC1.27□□□□□ -2.21
MBD3O95983 SNORD116-11-201ENST00000383882 92 ntBASIC1.27□□□□□ -2.21
MBD3O95983 RNU6-17P-201ENST00000384245 107 ntBASIC1.27□□□□□ -2.21
MBD3O95983 RNU6-18P-201ENST00000384527 107 ntBASIC1.27□□□□□ -2.21
MBD3O95983 MIR517A-201ENST00000385001 87 ntBASIC1.27□□□□□ -2.21
MBD3O95983 RNA5SP213-201ENST00000391031 106 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms