Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU1-57P-201ENST00000384491 166 ntBASIC2.53□□□□□ -2
CNOT3O75175 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
CNOT3O75175 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
CNOT3O75175 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.53□□□□□ -2
CNOT3O75175 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.53□□□□□ -2
CNOT3O75175 HSPE1P25-201ENST00000455484 251 ntBASIC2.53□□□□□ -2
CNOT3O75175 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
CNOT3O75175 RNU6-625P-201ENST00000459412 107 ntBASIC2.53□□□□□ -2
CNOT3O75175 RPL26P26-201ENST00000480251 434 ntBASIC2.53□□□□□ -2
CNOT3O75175 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.53□□□□□ -2
CNOT3O75175 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
CNOT3O75175 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
CNOT3O75175 SNRPGP20-201ENST00000604477 205 ntBASIC2.53□□□□□ -2
CNOT3O75175 AL670379.2-201ENST00000604983 252 ntBASIC2.53□□□□□ -2
CNOT3O75175 AC006001.4-201ENST00000622243 395 ntBASIC2.53□□□□□ -2
CNOT3O75175 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
CNOT3O75175 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CNOT3O75175 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CNOT3O75175 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CNOT3O75175 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CNOT3O75175 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CNOT3O75175 RNU6-1210P-201ENST00000363775 107 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 Y_RNA.498-201ENST00000384460 102 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 AC009310.1-201ENST00000414414 451 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.52□□□□□ -2.01
CNOT3O75175 AC027124.2-201ENST00000428249 105 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.52□□□□□ -2.01
CNOT3O75175 AC091179.3-201ENST00000474761 144 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 AC145146.1-201ENST00000496370 254 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 SERF1AP1-201ENST00000514575 187 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 HSPE1P18-201ENST00000517602 280 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.52□□□□□ -2.01
CNOT3O75175 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CNOT3O75175 BX322639.1-202ENST00000423987 2213 ntBASIC2.52□□□□□ -2.01
CNOT3O75175 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CNOT3O75175 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CNOT3O75175 RNU6-514P-201ENST00000384208 107 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 Y_RNA.539-201ENST00000384635 107 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 Y_RNA.569-201ENST00000384749 103 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CNOT3O75175 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 AC009414.1-201ENST00000427200 443 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 RPL23AP3-201ENST00000453844 468 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 AC007215.1-201ENST00000464893 276 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 AL121594.1-201ENST00000475906 575 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 RNU6-138P-201ENST00000515952 107 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 RNU6-107P-201ENST00000516643 102 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.51□□□□□ -2.01
CNOT3O75175 AK6P2-201ENST00000549020 471 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.51□□□□□ -2.01
CNOT3O75175 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 MIR4765-201ENST00000585007 77 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 uc_338.14-201ENST00000613162 166 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 UCA1.1-201ENST00000620952 75 ntBASIC2.51□□□□□ -2.01
CNOT3O75175 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
CNOT3O75175 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CNOT3O75175 AL109809.4-201ENST00000603520 2185 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CNOT3O75175 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
CNOT3O75175 SNORA25.1-201ENST00000362326 128 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 U3.9-201ENST00000363823 204 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 RNA5SP68-201ENST00000363885 119 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 Y_RNA.331-201ENST00000365267 102 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 RNU6-245P-201ENST00000384020 107 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 Y_RNA.570-201ENST00000384750 101 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.5□□□□□ -2.01
CNOT3O75175 POLR2KP2-201ENST00000438155 177 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
CNOT3O75175 IFNA11P-201ENST00000446352 526 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 snoU13.14-201ENST00000459372 104 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 RPL23AP70-201ENST00000483361 460 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 RPS23P5-201ENST00000495419 428 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 MRPS36P2-201ENST00000512569 299 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 RNU2-31P-201ENST00000516954 155 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 PRELID2P1-201ENST00000552837 301 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 AC018448.1-201ENST00000552843 316 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.5□□□□□ -2.01
CNOT3O75175 BX284668.6-201ENST00000606899 438 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 PCGEM1.1-201ENST00000613431 131 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 MIR6817-201ENST00000615588 66 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 U2.14-201ENST00000615943 113 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 AC090517.3-201ENST00000625170 141 ntBASIC2.5□□□□□ -2.01
CNOT3O75175 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CNOT3O75175 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
CNOT3O75175 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CNOT3O75175 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.5□□□□□ -2.01
CNOT3O75175 AL359854.1-201ENST00000614203 1594 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.49□□□□□ -2.01
CNOT3O75175 RNU4-15P-201ENST00000362613 141 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 Y_RNA.230-201ENST00000364348 109 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 Y_RNA.269-201ENST00000364685 89 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CNOT3O75175 SNORA18.2-201ENST00000383865 132 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 SNORA46.1-201ENST00000391069 153 ntBASIC2.49□□□□□ -2.01
CNOT3O75175 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms