Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC004866.1-201ENST00000411748 78 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 BX295541.1-201ENST00000417774 250 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.66□□□□□ -2.3
KDELR3O43731 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.66□□□□□ -2.3
KDELR3O43731 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.66□□□□□ -2.3
KDELR3O43731 HMGB1P29-201ENST00000505659 499 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNU6-947P-201ENST00000516264 106 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNA5SP220-201ENST00000516298 104 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 RNU6-1223P-201ENST00000517124 104 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 MRPS36P4-201ENST00000534436 298 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 HIF1AP1-201ENST00000553642 175 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 SUB1P2-201ENST00000556401 297 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 AL078603.1-201ENST00000603824 313 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 AC079248.2-201ENST00000623779 326 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 U6.108-201ENST00000637764 58 ntBASIC0.66□□□□□ -2.3
KDELR3O43731 AL390237.1-201ENST00000404226 1415 ntBASIC0.65□□□□□ -2.3
KDELR3O43731 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
KDELR3O43731 Y_RNA.123-201ENST00000363338 102 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 MTCO2P34-201ENST00000421994 607 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
KDELR3O43731 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
KDELR3O43731 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.65□□□□□ -2.31
KDELR3O43731 MTND4P7-201ENST00000523876 130 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 APOOP3-201ENST00000536787 586 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 AC090049.2-201ENST00000550377 109 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 AC022432.1-201ENST00000595739 310 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 SNORD11B-201ENST00000607707 90 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 AC122133.1-201ENST00000613964 233 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 SCARNA4-201ENST00000629045 128 ntBASIC0.65□□□□□ -2.31
KDELR3O43731 FGF7P2-201ENST00000332473 296 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 RNU6-1120P-201ENST00000362988 108 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 RNU6-553P-201ENST00000364047 96 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 RNY1P14-201ENST00000384426 108 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 MIR518E-201ENST00000385252 88 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 MIR653-201ENST00000385279 96 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 RNA5SP219-201ENST00000390940 113 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 AF228730.1-201ENST00000397972 663 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 CYCSP46-201ENST00000423569 204 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.64□□□□□ -2.31
KDELR3O43731 BET1P1-201ENST00000482276 359 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 RNU1-117P-201ENST00000517041 158 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 AC087854.1-201ENST00000519706 414 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
KDELR3O43731 AC245884.10-201ENST00000597355 337 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 uc_338.34-201ENST00000617467 174 ntBASIC0.64□□□□□ -2.31
KDELR3O43731 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.63□□□□□ -2.31
KDELR3O43731 SNORD41-201ENST00000386967 70 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.63□□□□□ -2.31
KDELR3O43731 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.63□□□□□ -2.31
KDELR3O43731 AC005002.2-201ENST00000438228 269 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 RNU7-125P-201ENST00000458760 62 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 RNU7-63P-201ENST00000459054 62 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.63□□□□□ -2.31
KDELR3O43731 SNORA14.1-201ENST00000516113 141 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC016957.1-201ENST00000534895 309 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.63□□□□□ -2.31
KDELR3O43731 MIR5583-1-201ENST00000580941 59 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC234772.3-201ENST00000602277 528 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC072046.2-201ENST00000618366 268 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 AC139792.3-201ENST00000623525 224 ntBASIC0.63□□□□□ -2.31
KDELR3O43731 FER-210ENST00000628534 558 ntTSL 5 BASIC0.63□□□□□ -2.31
KDELR3O43731 SNORA67.2-201ENST00000384300 149 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.62□□□□□ -2.31
KDELR3O43731 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.62□□□□□ -2.31
KDELR3O43731 FABP5P4-201ENST00000437203 171 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 RNU7-99P-201ENST00000516271 62 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.62□□□□□ -2.31
KDELR3O43731 AC009094.1-201ENST00000564443 426 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 MIR4778-201ENST00000577635 80 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 ZNF204P-201ENST00000416749 2397 ntBASIC0.62□□□□□ -2.31
KDELR3O43731 AP000568.1-201ENST00000282964 442 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNA5SP361-201ENST00000362686 118 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 Y_RNA.201-201ENST00000364052 96 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-1317P-201ENST00000364582 104 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-969P-201ENST00000383900 105 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-245P-201ENST00000384020 107 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-42P-201ENST00000384165 107 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-297P-201ENST00000384636 107 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.61□□□□□ -2.31
KDELR3O43731 MTATP6P18-201ENST00000417994 673 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.61□□□□□ -2.31
KDELR3O43731 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.61□□□□□ -2.31
KDELR3O43731 RNU7-180P-201ENST00000459240 63 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNA5SP54-201ENST00000516951 92 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RNA5SP454-201ENST00000517231 127 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
KDELR3O43731 SCOCP1-201ENST00000554676 349 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 MIR3913-1-201ENST00000577744 102 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 AC004223.2-201ENST00000590309 544 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RMST_3.1-201ENST00000611651 109 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 U6.73-201ENST00000619194 103 ntBASIC0.61□□□□□ -2.31
KDELR3O43731 AC068700.1-201ENST00000565862 3754 ntBASIC0.6□□□□□ -2.31
KDELR3O43731 CASC19-280ENST00000642102 1351 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms