Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 RNU6-988P-201ENST00000519081 107 ntBASIC2.58□□□□□ -2
TSPAN6O43657 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
TSPAN6O43657 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
TSPAN6O43657 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
TSPAN6O43657 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
TSPAN6O43657 RNY1P14-201ENST00000384426 108 ntBASIC2.57□□□□□ -2
TSPAN6O43657 AL355497.1-201ENST00000406262 551 ntBASIC2.57□□□□□ -2
TSPAN6O43657 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
TSPAN6O43657 AC011406.1-201ENST00000512440 370 ntBASIC2.57□□□□□ -2
TSPAN6O43657 RNU4-77P-201ENST00000516692 156 ntBASIC2.57□□□□□ -2
TSPAN6O43657 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
TSPAN6O43657 RN7SKP295-201ENST00000517264 153 ntBASIC2.57□□□□□ -2
TSPAN6O43657 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.57□□□□□ -2
TSPAN6O43657 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
TSPAN6O43657 AC006001.4-201ENST00000622243 395 ntBASIC2.57□□□□□ -2
TSPAN6O43657 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.57□□□□□ -2
TSPAN6O43657 RNU6-1240P-201ENST00000365155 104 ntBASIC2.56□□□□□ -2
TSPAN6O43657 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
TSPAN6O43657 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
TSPAN6O43657 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
TSPAN6O43657 SNORA25.10-201ENST00000515926 124 ntBASIC2.56□□□□□ -2
TSPAN6O43657 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.56□□□□□ -2
TSPAN6O43657 AL353149.1-201ENST00000610667 244 ntBASIC2.56□□□□□ -2
TSPAN6O43657 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.56□□□□□ -2
TSPAN6O43657 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
TSPAN6O43657 AL512604.1-201ENST00000404812 257 ntBASIC2.55□□□□□ -2
TSPAN6O43657 MCFD2P1-201ENST00000417812 300 ntBASIC2.55□□□□□ -2
TSPAN6O43657 SDAD1P3-201ENST00000427380 333 ntBASIC2.55□□□□□ -2
TSPAN6O43657 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.55□□□□□ -2
TSPAN6O43657 AC093852.1-201ENST00000503587 266 ntBASIC2.55□□□□□ -2
TSPAN6O43657 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.55□□□□□ -2
TSPAN6O43657 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
TSPAN6O43657 RNA5SP76-201ENST00000516277 87 ntBASIC2.55□□□□□ -2
TSPAN6O43657 AC025647.1-201ENST00000517879 253 ntBASIC2.55□□□□□ -2
TSPAN6O43657 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.55□□□□□ -2
TSPAN6O43657 AK6P2-201ENST00000549020 471 ntBASIC2.55□□□□□ -2
TSPAN6O43657 MIR4287-201ENST00000579398 78 ntBASIC2.55□□□□□ -2
TSPAN6O43657 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
TSPAN6O43657 AL357075.2-201ENST00000614906 189 ntBASIC2.55□□□□□ -2
TSPAN6O43657 AL162373.1-201ENST00000620433 407 ntBASIC2.55□□□□□ -2
TSPAN6O43657 CTSLP2-204ENST00000629029 392 ntBASIC2.55□□□□□ -2
TSPAN6O43657 MIR410-201ENST00000362222 80 ntBASIC2.54□□□□□ -2
TSPAN6O43657 AC117470.1-201ENST00000381974 330 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR515-2-201ENST00000384883 83 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR515-1-201ENST00000384884 83 ntBASIC2.54□□□□□ -2
TSPAN6O43657 SNORA48.1-201ENST00000390879 135 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MRPL35P1-201ENST00000404272 572 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR548P-201ENST00000408336 84 ntBASIC2.54□□□□□ -2
TSPAN6O43657 ELOCP21-201ENST00000412558 336 ntBASIC2.54□□□□□ -2
TSPAN6O43657 AC060773.1-201ENST00000421698 310 ntBASIC2.54□□□□□ -2
TSPAN6O43657 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
TSPAN6O43657 RNU6-1041P-201ENST00000516254 102 ntBASIC2.54□□□□□ -2
TSPAN6O43657 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR5188-201ENST00000583467 113 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
TSPAN6O43657 MIR3674-201ENST00000636576 68 ntBASIC2.54□□□□□ -2
TSPAN6O43657 ZNF702P-202ENST00000434269 1966 ntBASIC2.54□□□□□ -2
TSPAN6O43657 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TSPAN6O43657 AC005592.1-201ENST00000566527 1640 ntBASIC2.53□□□□□ -2
TSPAN6O43657 Y_RNA.28-201ENST00000362554 111 ntBASIC2.53□□□□□ -2
TSPAN6O43657 snoU2-30.2-201ENST00000362805 70 ntBASIC2.53□□□□□ -2
TSPAN6O43657 Y_RNA.424-201ENST00000384063 103 ntBASIC2.53□□□□□ -2
TSPAN6O43657 RNU6-926P-201ENST00000384075 107 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MIR1302-11-201ENST00000408051 138 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MIR1302-9-201ENST00000408365 138 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MIR1302-10-201ENST00000408734 138 ntBASIC2.53□□□□□ -2
TSPAN6O43657 AL158823.1-201ENST00000418441 478 ntBASIC2.53□□□□□ -2
TSPAN6O43657 RAB28P5-201ENST00000427490 651 ntBASIC2.53□□□□□ -2
TSPAN6O43657 HMGN2P34-201ENST00000437647 269 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MTND4P19-201ENST00000446659 478 ntBASIC2.53□□□□□ -2
TSPAN6O43657 CHEK2P4-201ENST00000450340 246 ntBASIC2.53□□□□□ -2
TSPAN6O43657 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
TSPAN6O43657 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
TSPAN6O43657 YWHAEP4-201ENST00000505390 198 ntBASIC2.53□□□□□ -2
TSPAN6O43657 RNU6-1012P-201ENST00000516606 109 ntBASIC2.53□□□□□ -2
TSPAN6O43657 Y_RNA.713-201ENST00000517013 96 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
TSPAN6O43657 MIR1302-2-201ENST00000607096 138 ntBASIC2.53□□□□□ -2
TSPAN6O43657 AC069234.5-201ENST00000611056 416 ntBASIC2.53□□□□□ -2
TSPAN6O43657 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
TSPAN6O43657 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TSPAN6O43657 ZNF72P-201ENST00000425869 1908 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
TSPAN6O43657 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TSPAN6O43657 Y_RNA.80-201ENST00000362996 102 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 RNU4-50P-201ENST00000364361 141 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 RNU4-76P-201ENST00000364509 141 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 SNORA67.4-201ENST00000384688 142 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 RNA5SP501-201ENST00000410990 112 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
TSPAN6O43657 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 RNU6-408P-201ENST00000515910 100 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
TSPAN6O43657 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.52□□□□□ -2.01
TSPAN6O43657 MIR4659A-201ENST00000580269 81 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AC044792.1-201ENST00000593294 196 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AL109918.3-201ENST00000603072 338 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AL390123.1-201ENST00000603216 237 ntBASIC2.52□□□□□ -2.01
TSPAN6O43657 AC069114.2-201ENST00000604699 304 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms