Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 MIR3941-201ENST00000582572 103 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 Z99129.1-201ENST00000612510 255 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
CHMP2AO43633 RNU6-1305P-201ENST00000364353 104 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 MIR514A2-201ENST00000385131 88 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 MIR514A3-201ENST00000385132 88 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 RNA5SP504-201ENST00000410676 117 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 Y_RNA.615-201ENST00000410769 117 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP2AO43633 AC005002.2-201ENST00000438228 269 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP2AO43633 AL359672.1-201ENST00000442302 409 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 Y_RNA.654-201ENST00000497848 106 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.04□□□□□ -2.24
CHMP2AO43633 AC067942.3-201ENST00000512025 362 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 RNU1-117P-201ENST00000517041 158 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.04□□□□□ -2.24
CHMP2AO43633 TPRKBP2-201ENST00000565969 475 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP2AO43633 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 AC097065.2-201ENST00000608159 533 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP2AO43633 AC097520.1-201ENST00000624435 385 ntBASIC1.04□□□□□ -2.24
CHMP2AO43633 ZNF204P-201ENST00000416749 2397 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CHMP2AO43633 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CHMP2AO43633 Y_RNA.51-201ENST00000362725 102 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 Y_RNA.151-201ENST00000363566 112 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 RNU6-57P-201ENST00000411348 103 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.03□□□□□ -2.24
CHMP2AO43633 CST2P1-201ENST00000425770 87 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 AC010154.1-201ENST00000425857 269 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 PGBD4P5-201ENST00000445958 426 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 AC114982.1-201ENST00000469402 321 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 RPS26P45-201ENST00000471748 340 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.03□□□□□ -2.24
CHMP2AO43633 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.03□□□□□ -2.24
CHMP2AO43633 CPDP1-201ENST00000579660 283 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 MIR4753-201ENST00000585119 83 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.03□□□□□ -2.24
CHMP2AO43633 AC092954.2-201ENST00000609103 430 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 AC027514.1-201ENST00000588561 1603 ntBASIC1.03□□□□□ -2.24
CHMP2AO43633 SNORD50.1-201ENST00000362987 71 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 SNORD113-7-201ENST00000363762 77 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 SNORD87-201ENST00000364849 89 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 RNU6-975P-201ENST00000384296 105 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 SNORA67.2-201ENST00000384300 149 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 SNORD116-1-201ENST00000384335 95 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CHMP2AO43633 MTCO1P21-201ENST00000416634 589 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 COX6CP10-201ENST00000416832 224 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 NFU1P2-201ENST00000448700 469 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 HSPE1P13-201ENST00000451143 297 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.02□□□□□ -2.25
CHMP2AO43633 RPL23AP75-201ENST00000491601 451 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.02□□□□□ -2.25
CHMP2AO43633 AC079140.5-201ENST00000507882 310 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 Y_RNA.688-201ENST00000516565 95 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.02□□□□□ -2.25
CHMP2AO43633 AL442163.3-201ENST00000554110 156 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 AC010525.2-201ENST00000590920 195 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 RNU6-89P-201ENST00000606519 100 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 TCL6_2.1-201ENST00000615162 119 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 AL136221.1-201ENST00000621449 509 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 AC068647.2-201ENST00000637380 353 ntBASIC1.02□□□□□ -2.25
CHMP2AO43633 RNU6-82P-201ENST00000363970 107 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 RNU4-75P-201ENST00000364621 146 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 RNA5SP259-201ENST00000365541 109 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 Y_RNA.373-201ENST00000365600 103 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 RNU6-259P-201ENST00000383999 107 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 RNU6-1106P-201ENST00000390845 107 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 MTCO3P40-201ENST00000392516 676 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 U8.21-201ENST00000459536 136 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 Y_RNA.665-201ENST00000516177 98 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 RNU6-405P-201ENST00000516637 110 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 MTND1P35-201ENST00000526739 508 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 AK6P2-201ENST00000549020 471 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.01□□□□□ -2.25
CHMP2AO43633 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 U6.108-201ENST00000637764 58 ntBASIC1.01□□□□□ -2.25
CHMP2AO43633 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1□□□□□ -2.25
CHMP2AO43633 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CHMP2AO43633 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
CHMP2AO43633 Y_RNA.41-201ENST00000362646 102 ntBASIC1□□□□□ -2.25
CHMP2AO43633 snoU2-30.2-201ENST00000362805 70 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms