Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PHGDHO43175 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PHGDHO43175 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PHGDHO43175 Y_RNA.143-201ENST00000363520 106 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 U3.8-201ENST00000363675 217 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 Y_RNA.176-201ENST00000363815 109 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 RNU6-770P-201ENST00000363929 105 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 Y_RNA.332-201ENST00000365271 113 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 RNU6-1264P-201ENST00000383891 107 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 AC123900.1-201ENST00000420390 96 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 MTCYBP9-201ENST00000431021 303 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.6□□□□□ -1.99
PHGDHO43175 AC098869.1-201ENST00000481627 292 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.6□□□□□ -1.99
PHGDHO43175 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.6□□□□□ -1.99
PHGDHO43175 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.6□□□□□ -1.99
PHGDHO43175 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.6□□□□□ -1.99
PHGDHO43175 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PHGDHO43175 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
PHGDHO43175 Y_RNA.19-201ENST00000362462 99 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 RNU6-626P-201ENST00000363354 107 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 Y_RNA.183-201ENST00000363882 113 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 Y_RNA.276-201ENST00000364732 109 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 SNORA72.2-201ENST00000365028 127 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 RNU6-20P-201ENST00000384106 107 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 RNU6-463P-201ENST00000384340 107 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 RNU6-121P-201ENST00000410525 99 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
PHGDHO43175 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.59□□□□□ -1.99
PHGDHO43175 RNU7-57P-201ENST00000459540 60 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 AC136932.1-201ENST00000574771 208 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 AC026271.5-201ENST00000577873 130 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 AC005176.2-201ENST00000596933 147 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 AL109918.3-201ENST00000603072 338 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 PRR13P7-201ENST00000605538 430 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
PHGDHO43175 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PHGDHO43175 Y_RNA.149-201ENST00000363558 117 ntBASIC2.58□□□□□ -2
PHGDHO43175 RNU6-418P-201ENST00000384035 107 ntBASIC2.58□□□□□ -2
PHGDHO43175 RNU6-1310P-201ENST00000384153 107 ntBASIC2.58□□□□□ -2
PHGDHO43175 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PHGDHO43175 NDUFB4P4-201ENST00000404822 243 ntBASIC2.58□□□□□ -2
PHGDHO43175 RNA5SP475-201ENST00000410568 110 ntBASIC2.58□□□□□ -2
PHGDHO43175 AC005002.2-201ENST00000438228 269 ntBASIC2.58□□□□□ -2
PHGDHO43175 AC016717.1-201ENST00000448918 286 ntBASIC2.58□□□□□ -2
PHGDHO43175 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
PHGDHO43175 7SK.10-201ENST00000621414 298 ntBASIC2.58□□□□□ -2
PHGDHO43175 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.58□□□□□ -2
PHGDHO43175 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
PHGDHO43175 MIR3674-201ENST00000636576 68 ntBASIC2.58□□□□□ -2
PHGDHO43175 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.58□□□□□ -2
PHGDHO43175 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.58□□□□□ -2
PHGDHO43175 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PHGDHO43175 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PHGDHO43175 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PHGDHO43175 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
PHGDHO43175 Y_RNA.99-201ENST00000363138 105 ntBASIC2.57□□□□□ -2
PHGDHO43175 RNU6-196P-201ENST00000384315 107 ntBASIC2.57□□□□□ -2
PHGDHO43175 RNU6-937P-201ENST00000384325 106 ntBASIC2.57□□□□□ -2
PHGDHO43175 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.57□□□□□ -2
PHGDHO43175 MIR1262-201ENST00000408276 93 ntBASIC2.57□□□□□ -2
PHGDHO43175 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
PHGDHO43175 RNU6-57P-201ENST00000411348 103 ntBASIC2.57□□□□□ -2
PHGDHO43175 EDDM3CP-201ENST00000415977 425 ntBASIC2.57□□□□□ -2
PHGDHO43175 COTL1P1-201ENST00000422309 375 ntBASIC2.57□□□□□ -2
PHGDHO43175 AC139712.2-201ENST00000424302 339 ntBASIC2.57□□□□□ -2
PHGDHO43175 TOMM22P2-201ENST00000430735 237 ntBASIC2.57□□□□□ -2
PHGDHO43175 LINC01399-202ENST00000458450 244 ntBASIC2.57□□□□□ -2
PHGDHO43175 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
PHGDHO43175 MYL12BP1-201ENST00000569826 507 ntBASIC2.57□□□□□ -2
PHGDHO43175 AC013412.1-201ENST00000610687 192 ntBASIC2.57□□□□□ -2
PHGDHO43175 AC022202.1-201ENST00000613515 211 ntBASIC2.57□□□□□ -2
PHGDHO43175 MIR376A1-201ENST00000616574 68 ntBASIC2.57□□□□□ -2
PHGDHO43175 AL137790.1-201ENST00000634283 177 ntBASIC2.57□□□□□ -2
PHGDHO43175 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
PHGDHO43175 SNORD14D-201ENST00000384390 87 ntBASIC2.56□□□□□ -2
PHGDHO43175 RPL21P38-201ENST00000418090 167 ntBASIC2.56□□□□□ -2
PHGDHO43175 IPO7P1-201ENST00000442031 636 ntBASIC2.56□□□□□ -2
PHGDHO43175 AC245102.2-201ENST00000448956 180 ntBASIC2.56□□□□□ -2
PHGDHO43175 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
PHGDHO43175 RNU6-1143P-201ENST00000516125 104 ntBASIC2.56□□□□□ -2
PHGDHO43175 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
PHGDHO43175 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
PHGDHO43175 AP002001.1-203ENST00000534002 267 ntBASIC2.56□□□□□ -2
PHGDHO43175 AC055872.1-201ENST00000570978 278 ntBASIC2.56□□□□□ -2
PHGDHO43175 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.56□□□□□ -2
PHGDHO43175 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.56□□□□□ -2
PHGDHO43175 AC004467.1-201ENST00000615678 330 ntBASIC2.56□□□□□ -2
PHGDHO43175 snoZ196.1-201ENST00000625269 89 ntBASIC2.56□□□□□ -2
PHGDHO43175 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.56□□□□□ -2
PHGDHO43175 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PHGDHO43175 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
PHGDHO43175 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PHGDHO43175 Y_RNA.230-201ENST00000364348 109 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms