Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 SEPT14P4-201ENST00000513445 186 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 Y_RNA.693-201ENST00000516641 110 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 FO082796.1-201ENST00000523795 183 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN3O15551 Z99129.1-201ENST00000612510 255 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 AC040896.1-201ENST00000613819 479 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN3O15551 AC022079.1-201ENST00000621546 602 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 AL359880.1-201ENST00000621879 266 ntBASIC1.31□□□□□ -2.2
CLDN3O15551 SNORD113-7-201ENST00000363762 77 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 RNU6-522P-201ENST00000364497 107 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 Y_RNA.287-201ENST00000364853 94 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 RNU6-534P-201ENST00000364877 106 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 RNA5SP109-201ENST00000391010 116 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.3□□□□□ -2.2
CLDN3O15551 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN3O15551 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 AC107401.1-201ENST00000503426 685 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN3O15551 AC008269.2-201ENST00000561915 1105 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 CYP3A52P-201ENST00000563326 91 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.3□□□□□ -2.2
CLDN3O15551 RNU6-1252P-201ENST00000363054 104 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 RNY1P10-201ENST00000363268 113 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 RNU6-128P-201ENST00000383976 107 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 AC008134.1-201ENST00000420943 193 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN3O15551 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN3O15551 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN3O15551 AC103851.1-201ENST00000506833 274 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 RNU6-344P-201ENST00000516635 111 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 RNA5SP54-201ENST00000516951 92 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 AC024995.1-201ENST00000523014 93 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 ZNF519P2-201ENST00000557032 169 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 AC010525.2-201ENST00000590920 195 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN3O15551 AL355802.3-201ENST00000607571 545 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 SNORD11B-201ENST00000607707 90 ntBASIC1.29□□□□□ -2.2
CLDN3O15551 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN3O15551 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLDN3O15551 RNU6-254P-201ENST00000363377 107 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 Y_RNA.151-201ENST00000363566 112 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 Y_RNA.372-201ENST00000365599 102 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 MIR32-201ENST00000384965 70 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 MTCO1P20-201ENST00000425366 358 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.28□□□□□ -2.2
CLDN3O15551 NDUFA5P4-201ENST00000436704 385 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 PCMTD1P1-201ENST00000455560 355 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.28□□□□□ -2.2
CLDN3O15551 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN3O15551 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN3O15551 RNU6-1281P-201ENST00000516223 105 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 RNU1-142P-201ENST00000516682 145 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN3O15551 AL442163.3-201ENST00000554110 156 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AL929325.1-201ENST00000603096 117 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AC006504.8-201ENST00000621046 635 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AC008873.1-201ENST00000625051 138 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 AC068137.3-201ENST00000639191 341 ntBASIC1.28□□□□□ -2.2
CLDN3O15551 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLDN3O15551 SNORD50.1-201ENST00000362987 71 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 RNU6-1240P-201ENST00000365155 104 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 SNORA67.2-201ENST00000384300 149 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CLDN3O15551 RPL21P1-201ENST00000399532 476 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN3O15551 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN3O15551 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN3O15551 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN3O15551 Y_RNA.704-201ENST00000516851 102 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AC025647.1-201ENST00000517879 253 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 MTND1P5-201ENST00000517906 940 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 POLR3GP2-201ENST00000588366 668 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AL162413.1-201ENST00000603198 110 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AL050343.2-201ENST00000607338 280 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AC245008.1-201ENST00000608123 476 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
CLDN3O15551 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 RNU4-9P-201ENST00000364951 139 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
CLDN3O15551 AC010154.1-201ENST00000425857 269 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.26□□□□□ -2.21
CLDN3O15551 RNU6-221P-201ENST00000459541 99 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 SNORA25.14-201ENST00000516481 132 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 RAB11AP2-201ENST00000545905 639 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 AL512310.8-201ENST00000550183 120 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 DISC2.1-201ENST00000612827 205 ntBASIC1.26□□□□□ -2.21
CLDN3O15551 AL359075.3-201ENST00000613288 217 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms