Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TO15178 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.97□□□□□ -2.09
TO15178 MIR559-201ENST00000385188 96 ntBASIC1.97□□□□□ -2.09
TO15178 RNA5SP465-201ENST00000391195 109 ntBASIC1.97□□□□□ -2.09
TO15178 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
TO15178 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
TO15178 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
TO15178 AF228730.4-201ENST00000421457 183 ntBASIC1.97□□□□□ -2.09
TO15178 DPH3P2-201ENST00000422618 250 ntBASIC1.97□□□□□ -2.09
TO15178 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.97□□□□□ -2.09
TO15178 AC139712.2-201ENST00000424302 339 ntBASIC1.97□□□□□ -2.09
TO15178 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.97□□□□□ -2.09
TO15178 MTCO1P44-201ENST00000441935 243 ntBASIC1.97□□□□□ -2.09
TO15178 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.97□□□□□ -2.09
TO15178 RNU6-948P-201ENST00000516374 107 ntBASIC1.97□□□□□ -2.09
TO15178 RNU2-34P-201ENST00000516534 121 ntBASIC1.97□□□□□ -2.09
TO15178 RNU1-117P-201ENST00000517041 158 ntBASIC1.97□□□□□ -2.09
TO15178 CYCSP23-201ENST00000519781 313 ntBASIC1.97□□□□□ -2.09
TO15178 AC093023.1-201ENST00000547375 507 ntBASIC1.97□□□□□ -2.09
TO15178 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
TO15178 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
TO15178 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
TO15178 AL133255.1-201ENST00000606374 441 ntBASIC1.97□□□□□ -2.09
TO15178 AL078596.1-201ENST00000624856 447 ntBASIC1.97□□□□□ -2.09
TO15178 AC008873.1-201ENST00000625051 138 ntBASIC1.97□□□□□ -2.09
TO15178 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
TO15178 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.97□□□□□ -2.09
TO15178 AC073544.1-201ENST00000600110 1595 ntBASIC1.97□□□□□ -2.09
TO15178 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
TO15178 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.96□□□□□ -2.1
TO15178 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
TO15178 RNA5SP126-201ENST00000365092 109 ntBASIC1.96□□□□□ -2.1
TO15178 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
TO15178 Y_RNA.509-201ENST00000384506 99 ntBASIC1.96□□□□□ -2.1
TO15178 RNA5SP213-201ENST00000391031 106 ntBASIC1.96□□□□□ -2.1
TO15178 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
TO15178 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
TO15178 AL357134.1-201ENST00000445848 426 ntBASIC1.96□□□□□ -2.1
TO15178 AC091179.3-201ENST00000474761 144 ntBASIC1.96□□□□□ -2.1
TO15178 HMGN2P9-201ENST00000476875 229 ntBASIC1.96□□□□□ -2.1
TO15178 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
TO15178 AC067942.3-201ENST00000512025 362 ntBASIC1.96□□□□□ -2.1
TO15178 RNU6-1170P-201ENST00000515974 106 ntBASIC1.96□□□□□ -2.1
TO15178 Y_RNA.683-201ENST00000516508 93 ntBASIC1.96□□□□□ -2.1
TO15178 RNU6-699P-201ENST00000517081 110 ntBASIC1.96□□□□□ -2.1
TO15178 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.96□□□□□ -2.1
TO15178 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.96□□□□□ -2.1
TO15178 AC087588.2-201ENST00000617667 426 ntBASIC1.96□□□□□ -2.1
TO15178 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
TO15178 Y_RNA.61-201ENST00000362835 102 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6-797P-201ENST00000363101 109 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
TO15178 RNA5SP493-201ENST00000364115 91 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6-879P-201ENST00000364328 108 ntBASIC1.95□□□□□ -2.1
TO15178 Y_RNA.314-201ENST00000365114 102 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6-418P-201ENST00000384035 107 ntBASIC1.95□□□□□ -2.1
TO15178 Y_RNA.428-201ENST00000384078 102 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6-975P-201ENST00000384296 105 ntBASIC1.95□□□□□ -2.1
TO15178 Y_RNA.579-201ENST00000390939 94 ntBASIC1.95□□□□□ -2.1
TO15178 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
TO15178 Y_RNA.605-201ENST00000410577 105 ntBASIC1.95□□□□□ -2.1
TO15178 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TO15178 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.95□□□□□ -2.1
TO15178 AC010095.1-201ENST00000443543 144 ntBASIC1.95□□□□□ -2.1
TO15178 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.95□□□□□ -2.1
TO15178 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.95□□□□□ -2.1
TO15178 AC010531.2-201ENST00000465012 153 ntBASIC1.95□□□□□ -2.1
TO15178 AC105758.1-201ENST00000506038 399 ntBASIC1.95□□□□□ -2.1
TO15178 AC022868.1-201ENST00000517767 391 ntBASIC1.95□□□□□ -2.1
TO15178 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.95□□□□□ -2.1
TO15178 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.95□□□□□ -2.1
TO15178 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
TO15178 MTND5P35-201ENST00000557537 1720 ntBASIC1.94□□□□□ -2.1
TO15178 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
TO15178 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
TO15178 RNU6-727P-201ENST00000363592 107 ntBASIC1.94□□□□□ -2.1
TO15178 Y_RNA.463-201ENST00000384271 102 ntBASIC1.94□□□□□ -2.1
TO15178 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TO15178 MIR1283-2-201ENST00000408621 87 ntBASIC1.94□□□□□ -2.1
TO15178 Y_RNA.592-201ENST00000410274 109 ntBASIC1.94□□□□□ -2.1
TO15178 Y_RNA.595-201ENST00000410403 105 ntBASIC1.94□□□□□ -2.1
TO15178 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
TO15178 MRPS18CP6-201ENST00000423587 223 ntBASIC1.94□□□□□ -2.1
TO15178 NDUFB4P10-201ENST00000452541 359 ntBASIC1.94□□□□□ -2.1
TO15178 RNU7-57P-201ENST00000459540 60 ntBASIC1.94□□□□□ -2.1
TO15178 AC027575.1-201ENST00000481064 460 ntBASIC1.94□□□□□ -2.1
TO15178 RNU6-976P-201ENST00000516086 111 ntBASIC1.94□□□□□ -2.1
TO15178 SNORD116.3-201ENST00000517176 78 ntBASIC1.94□□□□□ -2.1
TO15178 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
TO15178 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.94□□□□□ -2.1
TO15178 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.94□□□□□ -2.1
TO15178 AC125232.2-201ENST00000592457 143 ntBASIC1.94□□□□□ -2.1
TO15178 MZT1P2-201ENST00000604387 248 ntBASIC1.94□□□□□ -2.1
TO15178 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
TO15178 AL590240.4-201ENST00000616908 390 ntBASIC1.94□□□□□ -2.1
TO15178 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
TO15178 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TO15178 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TO15178 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
TO15178 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms