Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 Y_RNA.364-201ENST00000365532 101 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 Y_RNA.431-201ENST00000384086 102 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 MIR549A-201ENST00000385268 96 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.16□□□□□ -2.06
ATP2A1O14983 AC092423.1-201ENST00000430165 186 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 USP9YP16-201ENST00000430287 407 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 MTCO3P8-201ENST00000453691 755 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 USP9YP23-201ENST00000455085 407 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.16□□□□□ -2.06
ATP2A1O14983 RNU6-1114P-201ENST00000516022 107 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RNU6-120P-201ENST00000516077 103 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.16□□□□□ -2.06
ATP2A1O14983 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ATP2A1O14983 AL133255.1-201ENST00000606374 441 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 AL162373.1-201ENST00000620433 407 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.16□□□□□ -2.06
ATP2A1O14983 RNU6-874P-201ENST00000362390 105 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 Y_RNA.99-201ENST00000363138 105 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 RNU6-873P-201ENST00000363833 107 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 SNORD31B-201ENST00000364977 69 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 MIR10B-201ENST00000385011 110 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 MIR559-201ENST00000385188 96 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 RNA5SP213-201ENST00000391031 106 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 AC004866.1-201ENST00000411748 78 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
ATP2A1O14983 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.15□□□□□ -2.07
ATP2A1O14983 AC245102.2-201ENST00000448956 180 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.15□□□□□ -2.07
ATP2A1O14983 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 RNU2-19P-201ENST00000517288 84 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 ANP32BP3-201ENST00000559213 706 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 UBL5P4-201ENST00000562584 236 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 AC090617.3-201ENST00000573670 475 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.15□□□□□ -2.07
ATP2A1O14983 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 CYP2C61P-201ENST00000604072 290 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 AC022202.1-201ENST00000613515 211 ntBASIC2.15□□□□□ -2.07
ATP2A1O14983 MTND5P16-201ENST00000460269 1703 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATP2A1O14983 RNU6-222P-201ENST00000362438 107 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 Y_RNA.332-201ENST00000365271 113 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 RNU6-438P-201ENST00000365561 103 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 RNU6-1026P-201ENST00000384465 108 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR625-201ENST00000385047 85 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR1262-201ENST00000408276 93 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.14□□□□□ -2.07
ATP2A1O14983 AC016925.1-201ENST00000458303 298 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 SNORA25.14-201ENST00000516481 132 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 RNU6-344P-201ENST00000516635 111 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.14□□□□□ -2.07
ATP2A1O14983 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 AC080078.3-201ENST00000605407 463 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR1244-1-201ENST00000612829 85 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR1244-3-201ENST00000635744 85 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR1244-2-201ENST00000636449 85 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 MIR1244-4-202ENST00000636813 85 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATP2A1O14983 AC073544.1-201ENST00000600110 1595 ntBASIC2.14□□□□□ -2.07
ATP2A1O14983 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
ATP2A1O14983 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ATP2A1O14983 RNU6-1115P-201ENST00000362490 106 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 RNU1-62P-201ENST00000362599 164 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 Y_RNA.579-201ENST00000390939 94 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 MIR300-201ENST00000401138 83 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 RNU6-1156P-201ENST00000410365 100 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 AC099799.1-201ENST00000439809 192 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 AC003989.2-201ENST00000440224 169 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 MIR2053-201ENST00000459295 91 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.13□□□□□ -2.07
ATP2A1O14983 RNU7-4P-201ENST00000516961 62 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 AL050343.2-201ENST00000607338 280 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATP2A1O14983 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
ATP2A1O14983 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ATP2A1O14983 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
ATP2A1O14983 Y_RNA.535-201ENST00000384612 99 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 AC123900.1-201ENST00000420390 96 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 MTND4P28-201ENST00000426217 387 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.12□□□□□ -2.07
ATP2A1O14983 UBE2V1P7-201ENST00000446395 340 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.12□□□□□ -2.07
ATP2A1O14983 RNU7-87P-201ENST00000459343 62 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 RPL23AP63-201ENST00000498752 471 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
ATP2A1O14983 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.12□□□□□ -2.07
ATP2A1O14983 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms