Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP000870.1-201ENST00000472927 406 ntBASIC1.94□□□□□ -2.1
O00370 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.94□□□□□ -2.1
O00370 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
O00370 AC100812.1-201ENST00000607622 580 ntBASIC1.94□□□□□ -2.1
O00370 RMST_6.1-201ENST00000611980 203 ntBASIC1.94□□□□□ -2.1
O00370 AC084781.2-201ENST00000615568 161 ntBASIC1.94□□□□□ -2.1
O00370 AC130454.1-201ENST00000622948 401 ntBASIC1.94□□□□□ -2.1
O00370 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
O00370 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.93□□□□□ -2.1
O00370 RNU6-873P-201ENST00000363833 107 ntBASIC1.93□□□□□ -2.1
O00370 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
O00370 RNU6-867P-201ENST00000364956 107 ntBASIC1.93□□□□□ -2.1
O00370 RPS26P42-201ENST00000413485 326 ntBASIC1.93□□□□□ -2.1
O00370 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.93□□□□□ -2.1
O00370 MTND3P23-201ENST00000431980 347 ntBASIC1.93□□□□□ -2.1
O00370 Y_RNA.632-201ENST00000459189 102 ntBASIC1.93□□□□□ -2.1
O00370 AC022493.2-201ENST00000506122 481 ntBASIC1.93□□□□□ -2.1
O00370 SNORA25.14-201ENST00000516481 132 ntBASIC1.93□□□□□ -2.1
O00370 RNU6-264P-201ENST00000517134 104 ntBASIC1.93□□□□□ -2.1
O00370 AC026470.2-201ENST00000561492 181 ntBASIC1.93□□□□□ -2.1
O00370 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.93□□□□□ -2.1
O00370 AC004584.2-201ENST00000570407 410 ntBASIC1.93□□□□□ -2.1
O00370 AC005899.2-201ENST00000584353 90 ntBASIC1.93□□□□□ -2.1
O00370 SNRPGP20-201ENST00000604477 205 ntBASIC1.93□□□□□ -2.1
O00370 AC133104.2-201ENST00000615272 193 ntBASIC1.93□□□□□ -2.1
O00370 AL008636.1-201ENST00000625038 1018 ntBASIC1.93□□□□□ -2.1
O00370 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
O00370 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
O00370 Y_RNA.106-201ENST00000363189 100 ntBASIC1.92□□□□□ -2.1
O00370 SNORD115-32-201ENST00000364079 82 ntBASIC1.92□□□□□ -2.1
O00370 RNU6-99P-201ENST00000364721 107 ntBASIC1.92□□□□□ -2.1
O00370 MIR583-201ENST00000384846 75 ntBASIC1.92□□□□□ -2.1
O00370 RNY4P36-201ENST00000391116 96 ntBASIC1.92□□□□□ -2.1
O00370 AC004866.1-201ENST00000411748 78 ntBASIC1.92□□□□□ -2.1
O00370 SRIP3-201ENST00000413200 219 ntBASIC1.92□□□□□ -2.1
O00370 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
O00370 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
O00370 USP9YP16-201ENST00000430287 407 ntBASIC1.92□□□□□ -2.1
O00370 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.92□□□□□ -2.1
O00370 USP9YP23-201ENST00000455085 407 ntBASIC1.92□□□□□ -2.1
O00370 MIR2053-201ENST00000459295 91 ntBASIC1.92□□□□□ -2.1
O00370 RNU6-58P-201ENST00000517143 103 ntBASIC1.92□□□□□ -2.1
O00370 AC027288.2-201ENST00000553028 243 ntBASIC1.92□□□□□ -2.1
O00370 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
O00370 MIR4795-201ENST00000584182 89 ntBASIC1.92□□□□□ -2.1
O00370 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
O00370 MIR6845-201ENST00000613182 61 ntBASIC1.92□□□□□ -2.1
O00370 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
O00370 AL359314.1-201ENST00000616913 261 ntBASIC1.92□□□□□ -2.1
O00370 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
O00370 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
O00370 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
O00370 RNU4-73P-201ENST00000363164 141 ntBASIC1.91□□□□□ -2.1
O00370 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
O00370 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
O00370 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
O00370 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
O00370 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
O00370 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
O00370 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
O00370 AL033519.2-201ENST00000403958 392 ntBASIC1.91□□□□□ -2.1
O00370 AC007098.1-201ENST00000420122 367 ntBASIC1.91□□□□□ -2.1
O00370 MTCO2P27-201ENST00000420740 428 ntBASIC1.91□□□□□ -2.1
O00370 AC097473.1-201ENST00000508142 408 ntBASIC1.91□□□□□ -2.1
O00370 AC093303.1-201ENST00000514549 295 ntBASIC1.91□□□□□ -2.1
O00370 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.91□□□□□ -2.1
O00370 MIR4753-201ENST00000585119 83 ntBASIC1.91□□□□□ -2.1
O00370 AL590240.4-201ENST00000616908 390 ntBASIC1.91□□□□□ -2.1
O00370 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.91□□□□□ -2.1
O00370 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
O00370 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
O00370 MTND5P16-201ENST00000460269 1703 ntBASIC1.91□□□□□ -2.1
O00370 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
O00370 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.9□□□□□ -2.1
O00370 RNU1-76P-201ENST00000362903 159 ntBASIC1.9□□□□□ -2.11
O00370 RNU6-23P-201ENST00000363283 107 ntBASIC1.9□□□□□ -2.11
O00370 Y_RNA.132-201ENST00000363421 102 ntBASIC1.9□□□□□ -2.11
O00370 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
O00370 RNU6-17P-201ENST00000384245 107 ntBASIC1.9□□□□□ -2.11
O00370 SNORD116-29-201ENST00000384516 83 ntBASIC1.9□□□□□ -2.11
O00370 RNU6-18P-201ENST00000384527 107 ntBASIC1.9□□□□□ -2.11
O00370 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.9□□□□□ -2.11
O00370 MTCYBP10-201ENST00000424905 650 ntBASIC1.9□□□□□ -2.11
O00370 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
O00370 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
O00370 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.9□□□□□ -2.11
O00370 RPL17P19-201ENST00000489069 552 ntBASIC1.9□□□□□ -2.11
O00370 AC105758.1-201ENST00000506038 399 ntBASIC1.9□□□□□ -2.11
O00370 MTND3P22-201ENST00000510932 243 ntBASIC1.9□□□□□ -2.11
O00370 RNA5SP54-201ENST00000516951 92 ntBASIC1.9□□□□□ -2.11
O00370 AC104581.2-201ENST00000572227 430 ntBASIC1.9□□□□□ -2.11
O00370 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
O00370 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
O00370 MT-TD-201ENST00000387419 68 ntBASIC1.89□□□□□ -2.11
O00370 RNU6-482P-201ENST00000391068 107 ntBASIC1.89□□□□□ -2.11
O00370 SNORA75.6-201ENST00000391318 127 ntBASIC1.89□□□□□ -2.11
O00370 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
O00370 MIR190B-201ENST00000401119 79 ntBASIC1.89□□□□□ -2.11
O00370 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
O00370 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms