Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.52□□□□□ -2.17
PDLIM1O00151 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 AC005668.1-201ENST00000571142 476 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
PDLIM1O00151 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
PDLIM1O00151 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PDLIM1O00151 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.2-201ENST00000362330 96 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.405-201ENST00000383979 100 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.451-201ENST00000384200 100 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNU6-842P-201ENST00000384269 107 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.473-201ENST00000384333 102 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNU6-1235P-201ENST00000384559 107 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.524-201ENST00000384564 100 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 Y_RNA.561-201ENST00000384694 100 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 MIR586-201ENST00000385035 97 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC243428.1-201ENST00000421099 264 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RPS3AP52-201ENST00000435639 297 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC107399.1-201ENST00000451226 265 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 SNORD5.1-201ENST00000458800 75 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNU6-498P-201ENST00000459468 107 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 AC010409.1-201ENST00000487382 476 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNA5SP384-201ENST00000516615 116 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 RNU6-344P-201ENST00000516635 111 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.51□□□□□ -2.17
PDLIM1O00151 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
PDLIM1O00151 CASC19-280ENST00000642102 1351 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-727P-201ENST00000363592 107 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-873P-201ENST00000363833 107 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-595P-201ENST00000363944 107 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-280P-201ENST00000364145 104 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 Y_RNA.248-201ENST00000364501 109 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-17P-201ENST00000384245 107 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 Y_RNA.505-201ENST00000384489 102 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-18P-201ENST00000384527 107 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PDLIM1O00151 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PDLIM1O00151 MIR548K-201ENST00000408406 116 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-57P-201ENST00000411348 103 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 USMG5P1-201ENST00000425964 177 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC099677.2-201ENST00000436385 175 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.5□□□□□ -2.17
PDLIM1O00151 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU6-548P-201ENST00000517083 115 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC134698.4-201ENST00000523451 826 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC027288.2-201ENST00000553028 243 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.5□□□□□ -2.17
PDLIM1O00151 AC008269.2-201ENST00000561915 1105 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 UBL5P4-201ENST00000562584 236 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
PDLIM1O00151 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC018462.2-201ENST00000605375 395 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC126177.8-201ENST00000618339 1015 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 AC006001.4-201ENST00000622243 395 ntBASIC1.5□□□□□ -2.17
PDLIM1O00151 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.5□□□□□ -2.17
PDLIM1O00151 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.5□□□□□ -2.17
PDLIM1O00151 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PDLIM1O00151 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PDLIM1O00151 RNU1-62P-201ENST00000362599 164 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-112P-201ENST00000363599 104 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 Y_RNA.160-201ENST00000363677 92 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-137P-201ENST00000363680 108 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-767P-201ENST00000384132 107 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 Y_RNA.490-201ENST00000384413 102 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-159P-201ENST00000391080 106 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-876P-201ENST00000391295 104 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 MIR1253-201ENST00000408273 105 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-1050P-201ENST00000410388 107 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RPL37P10-201ENST00000412884 288 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 EBAG9P1-201ENST00000418955 543 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 MTCO3P29-201ENST00000432119 779 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 AC108210.2-201ENST00000503681 201 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 HMGN1P13-201ENST00000505795 138 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU6-1016P-201ENST00000516689 94 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU7-30P-201ENST00000516835 62 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 Y_RNA.706-201ENST00000516933 99 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 CBX3P8-201ENST00000532412 525 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.49□□□□□ -2.17
PDLIM1O00151 MIR4524B-201ENST00000581569 115 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
PDLIM1O00151 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
PDLIM1O00151 RNU5F-3P-201ENST00000363767 117 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 RNU6-1019P-201ENST00000364424 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms