Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL391903.3-201ENST00000612158 163 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AL133173.2-201ENST00000614270 90 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR7844-201ENST00000616161 122 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC139792.3-201ENST00000623525 224 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 SEPT14P19-203ENST00000633205 211 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-108P-201ENST00000365558 107 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-1029P-201ENST00000384109 107 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC233266.1-201ENST00000454518 96 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 RPL39P39-201ENST00000455840 151 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 RPS29P27-201ENST00000463711 170 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC022493.2-201ENST00000506122 481 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC025465.4-201ENST00000513422 638 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU7-99P-201ENST00000516271 62 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC025627.3-201ENST00000582078 182 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC242852.1-201ENST00000612151 96 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 U6.73-201ENST00000619194 103 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AC244015.1-201ENST00000622301 99 ntBASIC0.25□□□□□ -2.37
TRAV1-1A0A0B4J248 AP000568.1-201ENST00000282964 442 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-1097P-201ENST00000363586 107 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORD99-201ENST00000408612 74 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MTCO2P34-201ENST00000421994 607 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 GPR143P-201ENST00000434155 205 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MTCO2P7-201ENST00000446518 666 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU7-94P-201ENST00000459576 63 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 RN7SKP12-201ENST00000516275 143 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC069113.1-201ENST00000517763 267 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC027419.1-201ENST00000522976 328 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR1273G-201ENST00000577677 100 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR4703-201ENST00000577728 79 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MTND1P15-201ENST00000579262 949 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AC025449.1-201ENST00000603896 529 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR98-201ENST00000606724 119 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 AL360219.1-201ENST00000610230 366 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.24□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-424P-201ENST00000384367 105 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORD89-201ENST00000390981 114 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 Y_RNA.598-201ENST00000410480 95 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC098592.1-201ENST00000419352 333 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC098934.3-201ENST00000430450 190 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 RNA5SP436-201ENST00000516020 115 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-344P-201ENST00000516635 111 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AP003716.2-201ENST00000528260 108 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AC004223.2-201ENST00000590309 544 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 AL096861.1-201ENST00000610899 123 ntBASIC0.23□□□□□ -2.37
TRAV1-1A0A0B4J248 MTND4P9-201ENST00000507819 1346 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-227P-201ENST00000362865 103 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-1286P-201ENST00000383871 107 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNY1P8-201ENST00000383970 114 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU1-119P-201ENST00000391122 165 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNA5SP504-201ENST00000410676 117 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RPS3AP3-201ENST00000411933 242 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AL008987.1-201ENST00000415528 237 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AL009048.1-201ENST00000450437 298 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 SCARNA18-201ENST00000459004 134 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 Y_RNA.670-201ENST00000516255 105 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-612P-201ENST00000516909 102 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 RNU6-430P-201ENST00000517078 107 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 MTND2P32-201ENST00000521584 1038 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 SNRPGP20-201ENST00000604477 205 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 SNORA28-201ENST00000606769 126 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AC008133.2-201ENST00000624540 351 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AL078596.1-201ENST00000624856 447 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 AC007671.2-201ENST00000637344 619 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
TRAV1-1A0A0B4J248 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC106883.1-201ENST00000418805 562 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 RPL23AP50-201ENST00000434149 455 ntBASIC0.21□□□□□ -2.38
TRAV1-1A0A0B4J248 AC009961.2-201ENST00000435771 251 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms