Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 SNORD111.1-201ENST00000516421 86 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 AC090572.1-201ENST00000519251 160 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 MIR4305-201ENST00000583252 102 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 AC068792.1-201ENST00000621354 417 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 AL445984.1-201ENST00000637834 659 ntBASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN10AQ9Y5Y9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 Y_RNA.18-201ENST00000362461 102 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 RNA5SP323-201ENST00000391094 133 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 MIR1185-1-201ENST00000408598 86 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 C1DP2-201ENST00000418167 426 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AC119618.1-201ENST00000434191 222 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 C1DP4-201ENST00000455429 424 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 BET1P1-201ENST00000482276 359 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 SNORA70.12-201ENST00000516084 153 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 EIF1P4-201ENST00000572664 335 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 SNORA24.1-201ENST00000384401 135 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 MIR660-201ENST00000385235 97 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 MTCO2P6-201ENST00000463134 685 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AC079382.1-201ENST00000493346 557 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 Z99497.2-201ENST00000603634 310 ntBASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
SCN10AQ9Y5Y9 MIR32-201ENST00000384965 70 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC245047.8-201ENST00000456455 284 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 snoU13.25-201ENST00000458945 104 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 PRELID3BP2-201ENST00000605362 201 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 FAM157A-202ENST00000615155 405 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AL603839.4-201ENST00000624658 1005 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1287P-201ENST00000362914 107 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1060P-201ENST00000384664 107 ntBASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.25□□□□□ -2.37
SCN10AQ9Y5Y9 RNA5SP504-201ENST00000410676 117 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 CETN4P-201ENST00000432407 469 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 AC074290.1-201ENST00000448883 135 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 MTND4LP18-201ENST00000526864 291 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 AP003181.2-201ENST00000528941 181 ntBASIC0.24□□□□□ -2.37
SCN10AQ9Y5Y9 MIR103A2-201ENST00000362154 78 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU4-92P-201ENST00000363783 136 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-336P-201ENST00000364891 107 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC244098.3-201ENST00000424803 96 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 OR5AK4P-201ENST00000635912 903 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1240P-201ENST00000365155 104 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-108P-201ENST00000365558 107 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-39P-201ENST00000384344 107 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC016717.1-201ENST00000448918 286 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 MTCO2P18-201ENST00000457151 658 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 HMGN1P10-201ENST00000474557 553 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 MTND2P31-201ENST00000512602 616 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 MTND4LP26-201ENST00000518144 282 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC004223.2-201ENST00000590309 544 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 AC240442.1-201ENST00000616055 283 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 U6.108-201ENST00000637764 58 ntBASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SCN10AQ9Y5Y9 RNA5SP331-201ENST00000364986 107 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-440P-201ENST00000390882 105 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 RNU6-1000P-201ENST00000391066 106 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 NDUFB4P10-201ENST00000452541 359 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 AL163973.1-201ENST00000484753 577 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 RBBP4P6-201ENST00000508098 202 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 AC025465.4-201ENST00000513422 638 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 AC091178.2-201ENST00000584401 117 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 AC097065.2-201ENST00000608159 533 ntBASIC0.22□□□□□ -2.37
SCN10AQ9Y5Y9 RNU4-76P-201ENST00000364509 141 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms