Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 VN1R91P-201ENST00000594377 169 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 U2.1-201ENST00000618978 145 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AL162373.1-201ENST00000620433 407 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.145-201ENST00000363527 102 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.527-201ENST00000384573 102 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 MIR10B-201ENST00000385011 110 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.605-201ENST00000410577 105 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AL590556.1-201ENST00000423231 483 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 HMGN1P10-201ENST00000474557 553 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AC107032.1-201ENST00000485945 480 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AC145146.1-201ENST00000496370 254 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 UBL5P4-201ENST00000562584 236 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AC006600.1-201ENST00000572529 153 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AL713866.2-201ENST00000603579 219 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 AL132822.1-201ENST00000617063 513 ntBASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SNX9Q9Y5X1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.319-201ENST00000365138 92 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 RNU6-281P-201ENST00000384212 103 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 MIR549A-201ENST00000385268 96 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 RNU7-87P-201ENST00000459343 62 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 U8.20-201ENST00000459445 131 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 AC090515.1-201ENST00000465295 476 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 AC093852.1-201ENST00000503587 266 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1045P-201ENST00000516321 107 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 AC012640.5-201ENST00000623897 319 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 BX322639.1-202ENST00000423987 2213 ntBASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNX9Q9Y5X1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 SNORD32B-201ENST00000364460 84 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-318P-201ENST00000384283 103 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU2-63P-201ENST00000410792 194 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC114482.1-201ENST00000418010 247 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 HMGN2P38-201ENST00000423806 265 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC140059.1-201ENST00000489238 361 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RPS29P21-201ENST00000496272 170 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1114P-201ENST00000516022 107 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-764P-201ENST00000516396 105 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1046P-201ENST00000516538 107 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.720-201ENST00000517166 92 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 DEFB131C-201ENST00000528817 165 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AL442163.3-201ENST00000554110 156 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC113195.1-201ENST00000579952 141 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 MIR4648-201ENST00000580107 72 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC125232.2-201ENST00000592457 143 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC008737.2-201ENST00000599446 118 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 AC016727.2-201ENST00000603988 621 ntBASIC2.32□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.153-201ENST00000363615 91 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 RNU6-450P-201ENST00000364654 107 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 RNU4-56P-201ENST00000364700 142 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 SNORD14.1-201ENST00000365609 90 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.455-201ENST00000384230 98 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 SNORA46.1-201ENST00000391069 153 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 HMGB3P2-201ENST00000411913 584 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 USP9YP16-201ENST00000430287 407 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 USP9YP23-201ENST00000455085 407 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AC010469.2-201ENST00000496412 480 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 MIR2355-201ENST00000517199 87 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AC040926.1-201ENST00000530195 238 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 HSBP1P1-201ENST00000555205 166 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AC136443.5-201ENST00000603741 370 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AL138825.1-201ENST00000618587 192 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 AL078596.1-201ENST00000624856 447 ntBASIC2.31□□□□□ -2.04
SNX9Q9Y5X1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms