Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-121P-201ENST00000410525 99 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 RNU2-32P-201ENST00000411193 191 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC109329.2-201ENST00000519658 482 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AL161670.1-201ENST00000554348 137 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC136932.1-201ENST00000574771 208 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR4423-201ENST00000580922 80 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR3670-2-201ENST00000582974 65 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR3670-1-201ENST00000584160 65 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR3670-3-201ENST00000584855 65 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR3670-4-201ENST00000612260 65 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC006386.2-201ENST00000624491 75 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC012005.1-201ENST00000624575 75 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 AC008873.1-201ENST00000625051 138 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 MIR410-201ENST00000362222 80 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-626P-201ENST00000363354 107 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-727P-201ENST00000363592 107 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-806P-201ENST00000365147 105 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.498-201ENST00000384460 102 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNA5SP210-201ENST00000391034 120 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNA5SP504-201ENST00000410676 117 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 RNU5A-5P-201ENST00000411054 116 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 AC087499.2-201ENST00000432861 149 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 AC005002.2-201ENST00000438228 269 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 SRIP1-201ENST00000489235 288 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 MIR449C-201ENST00000516047 92 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 AP003733.2-201ENST00000529409 171 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 MIR4300-201ENST00000581016 96 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 MIR376A1-201ENST00000616574 68 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.76□□□□□ -1.97
PCDHA3Q9Y5H8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 RNA5SP125-201ENST00000364843 120 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-20P-201ENST00000384106 107 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.512-201ENST00000384518 102 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 IPO7P1-201ENST00000442031 636 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 RNU7-14P-201ENST00000459331 62 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-625P-201ENST00000459412 107 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 EIF4BP1-201ENST00000554881 351 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AC004817.2-201ENST00000561794 651 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 MIR3149-201ENST00000584629 83 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AL137790.1-201ENST00000634283 177 ntBASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 SNORD31B-201ENST00000364977 69 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-937P-201ENST00000384325 106 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 RNU2-48P-201ENST00000410694 191 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 AL390729.2-201ENST00000416137 156 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 RNA5SP282-201ENST00000516355 108 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 MIR7106-201ENST00000612419 65 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 MIR1248-201ENST00000629190 106 ntBASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHA3Q9Y5H8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 U3.8-201ENST00000363675 217 ntBASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-574P-201ENST00000384265 107 ntBASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHA3Q9Y5H8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms